Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cd40lgP27548 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm4732-201ENSMUST00000118778 473 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm12327-201ENSMUST00000121729 1168 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm13676-201ENSMUST00000122185 591 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm23326-201ENSMUST00000157419 105 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm28010-201ENSMUST00000179485 126 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm28030-201ENSMUST00000184987 138 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm37575-201ENSMUST00000195467 309 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm44294-201ENSMUST00000205090 728 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm18194-201ENSMUST00000210455 481 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm3565-201ENSMUST00000222670 609 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm23736-201ENSMUST00000082553 75 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Cd40lgP27548 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cd40lgP27548 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.23□□□□□ -1.89
Cd40lgP27548 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cd40lgP27548 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cd40lgP27548 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cd40lgP27548 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm6429-201ENSMUST00000117144 475 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm8569-201ENSMUST00000117630 647 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm4725-201ENSMUST00000151048 587 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm16147-201ENSMUST00000162143 373 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.22□□□□□ -1.89
Cd40lgP27548 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cd40lgP27548 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm24969-201ENSMUST00000180331 79 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm20162-201ENSMUST00000193629 871 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm19243-201ENSMUST00000198592 269 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm44404-201ENSMUST00000203979 636 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm19244-201ENSMUST00000204340 253 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm45327-201ENSMUST00000211612 565 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm23447-201ENSMUST00000082798 163 ntBASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cd40lgP27548 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.22□□□□□ -1.89
Cd40lgP27548 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.21□□□□□ -1.89
Cd40lgP27548 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.21□□□□□ -1.89
Cd40lgP27548 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm12568-201ENSMUST00000117362 624 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm14534-201ENSMUST00000120045 357 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm12691-201ENSMUST00000120186 456 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm14577-201ENSMUST00000121134 256 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm12578-201ENSMUST00000121244 417 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm12693-201ENSMUST00000121965 483 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm14903-201ENSMUST00000122435 537 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Cd40lgP27548 Snord92-201ENSMUST00000175548 85 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Mir6408-201ENSMUST00000183643 91 ntBASIC3.21□□□□□ -1.9
Cd40lgP27548 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.21□□□□□ -1.9
Cd40lgP27548 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms