Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm12149-201ENSMUST00000117511 654 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Klra14-ps-201ENSMUST00000119532 802 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm14600-201ENSMUST00000121032 630 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm23906-201ENSMUST00000157573 128 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm24960-201ENSMUST00000157923 90 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm17117-201ENSMUST00000163665 299 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm18128-201ENSMUST00000172625 511 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Mir3062-201ENSMUST00000174986 105 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm27163-201ENSMUST00000184767 409 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm43853-201ENSMUST00000197162 301 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm42926-201ENSMUST00000200496 697 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm43659-201ENSMUST00000200894 628 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm44475-201ENSMUST00000204041 424 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm18791-201ENSMUST00000204611 726 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm44852-201ENSMUST00000207950 369 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm45742-201ENSMUST00000212400 433 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC2.78□□□□□ -1.96
Sdc1P18828 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 AC158981.3-201ENSMUST00000226844 1024 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Vmn1r89-206ENSMUST00000227319 985 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Sdc1P18828 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Sdc1P18828 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Sdc1P18828 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm6913-201ENSMUST00000100019 348 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm16431-201ENSMUST00000117454 431 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm15480-201ENSMUST00000120442 519 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm13692-201ENSMUST00000120774 371 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm22769-201ENSMUST00000158367 98 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm20534-201ENSMUST00000172957 172 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm10067-201ENSMUST00000179462 348 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm22307-201ENSMUST00000180019 107 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm26866-201ENSMUST00000180414 802 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm26701-201ENSMUST00000181571 234 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm28002-201ENSMUST00000184832 100 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.77□□□□□ -1.97
Sdc1P18828 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm37416-201ENSMUST00000193596 318 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm37417-201ENSMUST00000195257 454 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm42502-201ENSMUST00000198550 1089 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm43604-201ENSMUST00000199799 705 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm8820-201ENSMUST00000204077 571 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm8209-201ENSMUST00000206386 553 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm18892-201ENSMUST00000217628 881 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 AC154198.1-201ENSMUST00000222839 424 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm6776-201ENSMUST00000057752 900 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm10237-201ENSMUST00000078393 273 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm22970-201ENSMUST00000083304 186 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm25630-201ENSMUST00000084000 162 ntBASIC2.77□□□□□ -1.97
Sdc1P18828 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Sdc1P18828 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Sdc1P18828 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Sdc1P18828 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc1P18828 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc1P18828 Gm15159-201ENSMUST00000117062 764 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm14981-201ENSMUST00000117325 943 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm13087-201ENSMUST00000118298 256 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm12902-201ENSMUST00000118389 322 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm14688-201ENSMUST00000119169 303 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm14463-201ENSMUST00000121117 498 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.76□□□□□ -1.97
Sdc1P18828 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms