Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Msx1P13297 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 Gm15029-201ENSMUST00000119742 199 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm5379-201ENSMUST00000120973 826 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm15244-201ENSMUST00000121122 130 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm12685-201ENSMUST00000121702 214 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm13531-201ENSMUST00000121893 543 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Msx1P13297 Gm23959-201ENSMUST00000157208 324 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm23232-201ENSMUST00000157300 105 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Mir1945-201ENSMUST00000157919 78 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm24487-201ENSMUST00000178017 63 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm25450-201ENSMUST00000179144 107 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm27476-201ENSMUST00000183366 104 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm29596-201ENSMUST00000185710 385 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm44494-201ENSMUST00000196760 129 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm42961-201ENSMUST00000202023 181 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm44184-201ENSMUST00000204290 132 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm18007-201ENSMUST00000205019 844 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 Gm18468-201ENSMUST00000207321 369 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm18465-201ENSMUST00000207468 369 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm18458-201ENSMUST00000207908 369 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.46□□□□□ -1.54
Msx1P13297 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 AC159896.1-201ENSMUST00000215264 215 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Mir27a-201ENSMUST00000083510 87 ntBASIC5.46□□□□□ -1.54
Msx1P13297 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.46□□□□□ -1.54
Msx1P13297 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Gm24817-201ENSMUST00000093672 105 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Msx1P13297 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Msx1P13297 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Msx1P13297 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Msx1P13297 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Msx1P13297 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Msx1P13297 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Msx1P13297 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Msx1P13297 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.46□□□□□ -1.54
Msx1P13297 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Msx1P13297 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Msx1P13297 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Msx1P13297 Mir1188-201ENSMUST00000116756 120 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm6274-201ENSMUST00000118173 797 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm15786-201ENSMUST00000121079 450 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm22026-201ENSMUST00000122735 281 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm25389-201ENSMUST00000157340 286 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm23312-201ENSMUST00000158774 102 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Gm3851-201ENSMUST00000168653 318 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm27285-201ENSMUST00000183875 127 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Mir7687-201ENSMUST00000184722 59 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm28957-201ENSMUST00000190174 373 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm28978-201ENSMUST00000191120 615 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm37763-201ENSMUST00000193445 120 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm44391-201ENSMUST00000198490 93 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm44076-201ENSMUST00000203072 520 ntBASIC5.45□□□□□ -1.54
Msx1P13297 LOC667541-201ENSMUST00000223408 278 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm26066-201ENSMUST00000083385 109 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Mir181b-2-201ENSMUST00000083644 89 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Msx1P13297 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.45□□□□□ -1.54
Msx1P13297 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.45□□□□□ -1.54
Msx1P13297 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Msx1P13297 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.44□□□□□ -1.54
Msx1P13297 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Msx1P13297 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms