Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm28844-202ENSMUST00000187977 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28752-201ENSMUST00000188340 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28429-201ENSMUST00000188521 363 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28797-201ENSMUST00000188543 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28855-201ENSMUST00000188680 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29378-201ENSMUST00000188723 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28569-201ENSMUST00000188748 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28120-201ENSMUST00000188812 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28369-201ENSMUST00000188993 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm21135-201ENSMUST00000189023 436 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29037-201ENSMUST00000189092 313 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28909-201ENSMUST00000189406 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29058-201ENSMUST00000189510 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28705-201ENSMUST00000189548 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28861-201ENSMUST00000189681 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29180-201ENSMUST00000190003 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29624-201ENSMUST00000190018 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28780-201ENSMUST00000190223 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28939-201ENSMUST00000190351 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28223-201ENSMUST00000190469 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29575-201ENSMUST00000190597 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29092-201ENSMUST00000190768 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28969-211ENSMUST00000190992 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm28990-207ENSMUST00000191219 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm29469-201ENSMUST00000191448 315 ntBASIC5.39□□□□□ -1.55
RaraP11416 Ighv12-2-201ENSMUST00000191949 362 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm36468-201ENSMUST00000192119 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm31572-201ENSMUST00000193341 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm20770-201ENSMUST00000193474 694 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm30175-201ENSMUST00000194173 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm9722-201ENSMUST00000194568 802 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm30858-201ENSMUST00000195516 615 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm8132-201ENSMUST00000204938 640 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm8745-201ENSMUST00000207846 782 ntBASIC5.39□□□□□ -1.55
RaraP11416 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.39□□□□□ -1.55
RaraP11416 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.39□□□□□ -1.55
RaraP11416 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.39□□□□□ -1.55
RaraP11416 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm23972-201ENSMUST00000083322 165 ntBASIC5.39□□□□□ -1.55
RaraP11416 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.39□□□□□ -1.55
RaraP11416 Gm25682-201ENSMUST00000083942 164 ntBASIC5.39□□□□□ -1.55
RaraP11416 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RaraP11416 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.39□□□□□ -1.55
RaraP11416 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.39□□□□□ -1.55
RaraP11416 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RaraP11416 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.39□□□□□ -1.55
RaraP11416 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RaraP11416 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RaraP11416 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.38□□□□□ -1.55
RaraP11416 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RaraP11416 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RaraP11416 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.38□□□□□ -1.55
RaraP11416 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RaraP11416 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Gm22831-201ENSMUST00000102473 109 ntBASIC5.38□□□□□ -1.55
RaraP11416 Gm15073-201ENSMUST00000117432 634 ntBASIC5.38□□□□□ -1.55
RaraP11416 Gm11631-201ENSMUST00000119220 156 ntBASIC5.38□□□□□ -1.55
RaraP11416 Gm15112-201ENSMUST00000120152 860 ntBASIC5.38□□□□□ -1.55
RaraP11416 Gm12155-201ENSMUST00000121267 160 ntBASIC5.38□□□□□ -1.55
RaraP11416 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.38□□□□□ -1.55
RaraP11416 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Gm25520-201ENSMUST00000158389 118 ntBASIC5.38□□□□□ -1.55
RaraP11416 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
RaraP11416 Mir6400-201ENSMUST00000184870 92 ntBASIC5.38□□□□□ -1.55
RaraP11416 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.38□□□□□ -1.55
RaraP11416 Gm37681-201ENSMUST00000193880 727 ntBASIC5.38□□□□□ -1.55
RaraP11416 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.38□□□□□ -1.55
RaraP11416 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.38□□□□□ -1.55
RaraP11416 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Gm45252-201ENSMUST00000211579 397 ntBASIC5.38□□□□□ -1.55
RaraP11416 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.38□□□□□ -1.55
RaraP11416 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Gm21937-201ENSMUST00000222825 218 ntBASIC5.38□□□□□ -1.55
RaraP11416 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.38□□□□□ -1.55
RaraP11416 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.38□□□□□ -1.55
RaraP11416 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RaraP11416 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RaraP11416 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
RaraP11416 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.38□□□□□ -1.55
RaraP11416 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RaraP11416 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RaraP11416 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RaraP11416 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RaraP11416 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RaraP11416 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RaraP11416 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.37□□□□□ -1.55
RaraP11416 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RaraP11416 Mir193b-201ENSMUST00000103784 79 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm13451-201ENSMUST00000117649 592 ntBASIC5.37□□□□□ -1.55
RaraP11416 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms