Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm23028-201ENSMUST00000158773 265 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm3123-201ENSMUST00000163480 480 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm22739-201ENSMUST00000083437 160 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Chmp6P0C0A3 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.51□□□□□ -1.85
Chmp6P0C0A3 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Mir592-201ENSMUST00000102113 96 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm24273-201ENSMUST00000102332 164 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm15108-201ENSMUST00000116160 803 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm15488-201ENSMUST00000121682 670 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm15111-201ENSMUST00000122142 878 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm24061-201ENSMUST00000157489 120 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm23865-201ENSMUST00000157723 97 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm16569-201ENSMUST00000160526 314 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm24819-201ENSMUST00000175094 166 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm24417-201ENSMUST00000178123 79 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm24653-201ENSMUST00000178541 79 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm25934-201ENSMUST00000178642 79 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm25944-201ENSMUST00000178758 94 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm43368-201ENSMUST00000200638 409 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm36776-201ENSMUST00000207006 203 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm18585-201ENSMUST00000215197 556 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm18704-201ENSMUST00000219736 446 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm9818-201ENSMUST00000050900 255 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm22245-201ENSMUST00000082479 103 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.5□□□□□ -1.85
Chmp6P0C0A3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Chmp6P0C0A3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Mir693-201ENSMUST00000102187 89 ntBASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Gm14795-201ENSMUST00000118461 471 ntBASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Gm11708-201ENSMUST00000119530 832 ntBASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Gm14845-201ENSMUST00000121259 306 ntBASIC3.49□□□□□ -1.85
Chmp6P0C0A3 Gm16359-201ENSMUST00000124511 289 ntBASIC3.49□□□□□ -1.85
Chmp6P0C0A3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms