Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BckdkO55028 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BckdkO55028 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BckdkO55028 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BckdkO55028 Gm23175-201ENSMUST00000104371 132 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BckdkO55028 Gm14622-201ENSMUST00000117117 468 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm14607-201ENSMUST00000119119 491 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm11708-201ENSMUST00000119530 832 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm7350-201ENSMUST00000120964 636 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm11896-201ENSMUST00000121105 820 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm16458-201ENSMUST00000121428 502 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm23791-201ENSMUST00000122553 293 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm25295-201ENSMUST00000122794 306 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
BckdkO55028 Gm22034-201ENSMUST00000157283 134 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm24875-201ENSMUST00000158888 104 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm25944-201ENSMUST00000178758 94 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm20574-201ENSMUST00000182867 917 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BckdkO55028 Gm28069-201ENSMUST00000189926 214 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm29011-201ENSMUST00000191059 712 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm37098-201ENSMUST00000192290 244 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm19030-201ENSMUST00000194947 552 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.08□□□□□ -1.92
BckdkO55028 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.08□□□□□ -1.92
BckdkO55028 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.08□□□□□ -1.92
BckdkO55028 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
BckdkO55028 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.08□□□□□ -1.92
BckdkO55028 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.08□□□□□ -1.92
BckdkO55028 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.08□□□□□ -1.92
BckdkO55028 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.08□□□□□ -1.92
BckdkO55028 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BckdkO55028 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BckdkO55028 Gm24611-201ENSMUST00000083272 107 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm10212-201ENSMUST00000087884 324 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm8074-201ENSMUST00000095071 252 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BckdkO55028 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.08□□□□□ -1.92
BckdkO55028 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
BckdkO55028 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
BckdkO55028 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
BckdkO55028 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.07□□□□□ -1.92
BckdkO55028 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BckdkO55028 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BckdkO55028 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
BckdkO55028 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BckdkO55028 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BckdkO55028 Gm14681-201ENSMUST00000118047 411 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm11881-201ENSMUST00000119408 572 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm14840-201ENSMUST00000122135 594 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm15733-201ENSMUST00000132957 242 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.07□□□□□ -1.92
BckdkO55028 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BckdkO55028 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BckdkO55028 Gm17204-201ENSMUST00000167936 478 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Mir6413-201ENSMUST00000184049 108 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BckdkO55028 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.07□□□□□ -1.92
BckdkO55028 Gm18340-201ENSMUST00000196342 609 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.07□□□□□ -1.92
BckdkO55028 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
BckdkO55028 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.07□□□□□ -1.92
BckdkO55028 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.07□□□□□ -1.92
BckdkO55028 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BckdkO55028 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
BckdkO55028 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
BckdkO55028 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.07□□□□□ -1.92
BckdkO55028 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
BckdkO55028 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
BckdkO55028 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.07□□□□□ -1.92
BckdkO55028 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
BckdkO55028 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
BckdkO55028 Mir673-201ENSMUST00000102361 91 ntBASIC3.06□□□□□ -1.92
BckdkO55028 Gm24831-201ENSMUST00000116778 126 ntBASIC3.06□□□□□ -1.92
BckdkO55028 Gm12739-201ENSMUST00000119769 382 ntBASIC3.06□□□□□ -1.92
BckdkO55028 Gm15157-201ENSMUST00000121852 702 ntBASIC3.06□□□□□ -1.92
BckdkO55028 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.06□□□□□ -1.92
BckdkO55028 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm23167-201ENSMUST00000157155 103 ntBASIC3.06□□□□□ -1.92
BckdkO55028 Gm23671-201ENSMUST00000157472 103 ntBASIC3.06□□□□□ -1.92
BckdkO55028 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
BckdkO55028 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
BckdkO55028 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms