Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm44675-201ENSMUST00000208188 2927 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.56□□□□□ -2
Cacna1bO55017 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm5347-201ENSMUST00000210542 2327 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cacna1bO55017 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cacna1bO55017 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cacna1bO55017 Gm27399-201ENSMUST00000184250 78 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm28871-201ENSMUST00000186191 687 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm28057-201ENSMUST00000186603 615 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Cacna1bO55017 Gm29366-201ENSMUST00000190481 699 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm43804-201ENSMUST00000198280 456 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Gm9377-201ENSMUST00000207227 623 ntBASIC2.56□□□□□ -2
Cacna1bO55017 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.56□□□□□ -2
Cacna1bO55017 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cacna1bO55017 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC2.55□□□□□ -2
Cacna1bO55017 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cacna1bO55017 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cacna1bO55017 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cacna1bO55017 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cacna1bO55017 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cacna1bO55017 Gm11221-201ENSMUST00000117230 597 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Gm15536-201ENSMUST00000121411 114 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Gm16471-201ENSMUST00000121940 618 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Gm22534-201ENSMUST00000158173 104 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Gm24930-201ENSMUST00000158315 83 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Mir3569-201ENSMUST00000185080 58 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Gm28625-201ENSMUST00000188309 205 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.55□□□□□ -2
Cacna1bO55017 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cacna1bO55017 Gm14988-201ENSMUST00000117224 1548 ntBASIC2.55□□□□□ -2
Cacna1bO55017 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Cacna1bO55017 Gm12871-201ENSMUST00000118758 438 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.54□□□□□ -2
Cacna1bO55017 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cacna1bO55017 Gm27898-201ENSMUST00000183987 80 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Gm38330-201ENSMUST00000192743 959 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cacna1bO55017 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cacna1bO55017 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cacna1bO55017 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cacna1bO55017 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC2.54□□□□□ -2
Cacna1bO55017 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Cacna1bO55017 Gm24210-201ENSMUST00000158263 133 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Gm5263-201ENSMUST00000163646 601 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Gm18867-201ENSMUST00000198022 1179 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Gm44477-201ENSMUST00000199661 110 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.54□□□□□ -2
Cacna1bO55017 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.54□□□□□ -2
Cacna1bO55017 AC132121.1-201ENSMUST00000220774 332 ntBASIC2.54□□□□□ -2
Cacna1bO55017 LOC667541-201ENSMUST00000223408 278 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cacna1bO55017 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cacna1bO55017 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cacna1bO55017 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cacna1bO55017 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Cacna1bO55017 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.54□□□□□ -2
Cacna1bO55017 Gm17752-201ENSMUST00000185787 3726 ntBASIC2.53□□□□□ -2
Cacna1bO55017 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.53□□□□□ -2
Cacna1bO55017 Gm7588-201ENSMUST00000216866 571 ntBASIC2.53□□□□□ -2
Cacna1bO55017 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.53□□□□□ -2
Cacna1bO55017 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cacna1bO55017 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
Cacna1bO55017 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
Cacna1bO55017 Gm14897-201ENSMUST00000118213 207 ntBASIC2.53□□□□□ -2
Cacna1bO55017 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cacna1bO55017 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cacna1bO55017 Gm24082-201ENSMUST00000175175 83 ntBASIC2.53□□□□□ -2
Cacna1bO55017 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cacna1bO55017 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.53□□□□□ -2
Cacna1bO55017 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.53□□□□□ -2
Cacna1bO55017 Gm45380-201ENSMUST00000210465 315 ntBASIC2.53□□□□□ -2
Cacna1bO55017 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.53□□□□□ -2
Cacna1bO55017 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
Cacna1bO55017 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm23472-201ENSMUST00000101806 191 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Snora36b-201ENSMUST00000104383 132 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm13862-201ENSMUST00000121220 197 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Snord93-201ENSMUST00000175580 71 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm24497-201ENSMUST00000177868 191 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm25939-201ENSMUST00000179876 191 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm26585-201ENSMUST00000180890 630 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Mir7039-201ENSMUST00000183852 85 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm38283-201ENSMUST00000193041 695 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm44161-201ENSMUST00000203532 253 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 AC160134.1-201ENSMUST00000213450 551 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm23444-201ENSMUST00000082922 191 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm38334-201ENSMUST00000195060 313 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm42828-201ENSMUST00000199669 469 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.52□□□□□ -2.01
Cacna1bO55017 Gm45588-201ENSMUST00000211213 630 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms