Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm28474-201ENSMUST00000188501 315 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.22□□□□□ -1.89
Efnb3O35393 Gm37771-201ENSMUST00000193121 265 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm43649-201ENSMUST00000196596 391 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm43407-201ENSMUST00000199816 317 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm44125-201ENSMUST00000203068 448 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Efnb3O35393 Gm20039-201ENSMUST00000210329 394 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm17989-201ENSMUST00000211543 412 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm45735-201ENSMUST00000212779 319 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm18488-201ENSMUST00000215082 364 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Efnb3O35393 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.22□□□□□ -1.89
Efnb3O35393 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Efnb3O35393 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm22810-201ENSMUST00000082741 158 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Gm25147-201ENSMUST00000083030 105 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Efnb3O35393 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Efnb3O35393 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.22□□□□□ -1.89
Efnb3O35393 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Efnb3O35393 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Efnb3O35393 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Efnb3O35393 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Efnb3O35393 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Efnb3O35393 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Efnb3O35393 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Efnb3O35393 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.21□□□□□ -1.89
Efnb3O35393 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Efnb3O35393 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Efnb3O35393 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.21□□□□□ -1.89
Efnb3O35393 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Efnb3O35393 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Efnb3O35393 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Efnb3O35393 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm14816-201ENSMUST00000117174 294 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm11372-201ENSMUST00000117348 570 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm14669-201ENSMUST00000118841 250 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm14688-201ENSMUST00000119169 303 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm11357-201ENSMUST00000119758 954 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm15177-201ENSMUST00000120491 577 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm23118-201ENSMUST00000122657 187 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.21□□□□□ -1.9
Efnb3O35393 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm22314-201ENSMUST00000158007 281 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm25334-201ENSMUST00000158036 110 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm22076-201ENSMUST00000158601 84 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.21□□□□□ -1.9
Efnb3O35393 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm26177-201ENSMUST00000178683 107 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
Efnb3O35393 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Efnb3O35393 Mir6963-201ENSMUST00000183535 71 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm27899-201ENSMUST00000184715 64 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Efnb3O35393 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm18900-201ENSMUST00000193218 584 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-6-201ENSMUST00000196127 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm44343-201ENSMUST00000196702 90 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-12-201ENSMUST00000197274 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-5-201ENSMUST00000197439 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-10-201ENSMUST00000197745 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-11-201ENSMUST00000197952 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm35702-201ENSMUST00000198653 511 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-4-201ENSMUST00000198665 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-9-201ENSMUST00000200087 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Mir669a-8-201ENSMUST00000200268 87 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm33626-201ENSMUST00000206790 828 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm45048-201ENSMUST00000207058 429 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.21□□□□□ -1.9
Efnb3O35393 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm46327-201ENSMUST00000218240 365 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm2446-201ENSMUST00000220144 772 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.21□□□□□ -1.9
Efnb3O35393 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Efnb3O35393 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Efnb3O35393 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Efnb3O35393 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.21□□□□□ -1.9
Efnb3O35393 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Efnb3O35393 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms