Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm13567-201ENSMUST00000118026 247 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm13454-201ENSMUST00000118166 483 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm6923-201ENSMUST00000118343 406 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm13831-201ENSMUST00000118764 302 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm14605-201ENSMUST00000120599 268 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm22107-201ENSMUST00000122548 100 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm24836-201ENSMUST00000122609 108 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm22613-201ENSMUST00000122679 292 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm12226-201ENSMUST00000144172 876 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm25999-201ENSMUST00000175398 133 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Mir6345-201ENSMUST00000184286 128 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm37416-201ENSMUST00000193596 318 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm44076-201ENSMUST00000203072 520 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm44274-201ENSMUST00000203417 256 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm17829-201ENSMUST00000219782 344 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm16261-201ENSMUST00000096813 205 ntBASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Trav13d-3J3QMG8 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm24430-201ENSMUST00000104077 104 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm22091-201ENSMUST00000116908 127 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm14566-201ENSMUST00000118915 321 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm14282-201ENSMUST00000119484 240 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm13743-201ENSMUST00000121486 724 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm26476-201ENSMUST00000122618 313 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm6058-201ENSMUST00000154261 399 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm22378-201ENSMUST00000157481 111 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Mir1251-201ENSMUST00000175486 84 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Mir7074-201ENSMUST00000183884 63 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm28118-201ENSMUST00000185957 294 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Npn2-202ENSMUST00000189275 235 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm36966-201ENSMUST00000192217 413 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Trbv11-201ENSMUST00000194354 260 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm43582-201ENSMUST00000196149 343 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm43604-201ENSMUST00000199799 705 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm17838-201ENSMUST00000205872 876 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm44611-201ENSMUST00000207507 355 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm10038-201ENSMUST00000077233 441 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm23443-201ENSMUST00000082916 128 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.41□□□□□ -1.86
Trav13d-3J3QMG8 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Trav13d-3J3QMG8 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Trav13d-3J3QMG8 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Trav13d-3J3QMG8 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Trav13d-3J3QMG8 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
Trav13d-3J3QMG8 Gm22269-201ENSMUST00000104002 130 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms