Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24504-201ENSMUST00000157679 100 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm24729-201ENSMUST00000158225 137 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm24216-201ENSMUST00000158259 117 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm8207-201ENSMUST00000171204 502 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Mir5099-201ENSMUST00000175257 74 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Mir6481-201ENSMUST00000184617 110 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29031-201ENSMUST00000185316 614 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29000-201ENSMUST00000185444 614 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28204-201ENSMUST00000185934 614 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28290-201ENSMUST00000186505 614 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28161-201ENSMUST00000186669 614 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28683-201ENSMUST00000187134 615 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28840-205ENSMUST00000189320 615 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28749-209ENSMUST00000189599 614 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28835-203ENSMUST00000190062 615 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm33163-201ENSMUST00000194504 614 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm33952-201ENSMUST00000197795 408 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm44063-201ENSMUST00000203307 376 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm44765-201ENSMUST00000206927 601 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm6112-201ENSMUST00000208037 629 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm26263-201ENSMUST00000083281 164 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Mir449a-201ENSMUST00000083641 91 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Pcdh1F7BJK1 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Pcdh1F7BJK1 Gm24429-201ENSMUST00000104076 132 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms