Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45192-201ENSMUST00000206749 283 ntBASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45445-201ENSMUST00000209586 232 ntBASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 CT009604.2-201ENSMUST00000225531 377 ntBASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC098719.1-201ENSMUST00000228920 371 ntBASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm9845-201ENSMUST00000056409 598 ntBASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm22043-201ENSMUST00000082993 158 ntBASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm37566-201ENSMUST00000192363 4355 ntBASIC1.82□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm43889-201ENSMUST00000203950 3681 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm26696-201ENSMUST00000181941 2848 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm9496-201ENSMUST00000191295 1601 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm23273-201ENSMUST00000104058 135 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm24280-201ENSMUST00000104237 134 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm24469-201ENSMUST00000104487 131 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm13973-201ENSMUST00000121371 894 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm22956-201ENSMUST00000122520 80 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm24546-201ENSMUST00000158652 102 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm27698-201ENSMUST00000184060 249 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45080-201ENSMUST00000206648 283 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm44600-201ENSMUST00000208540 111 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC132465.3-201ENSMUST00000219326 195 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm18116-201ENSMUST00000220920 537 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC140344.1-201ENSMUST00000223384 387 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC125539.1-202ENSMUST00000226449 670 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm24533-201ENSMUST00000083138 196 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm23249-201ENSMUST00000083369 161 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.81□□□□□ -2.12
Trav4-3A0A0B4J1K1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC117199.1-201ENSMUST00000219940 3132 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Snord66-201ENSMUST00000104051 75 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm2288-201ENSMUST00000118560 638 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm12803-201ENSMUST00000118907 821 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm14159-201ENSMUST00000119832 451 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm14240-201ENSMUST00000120353 546 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm22613-201ENSMUST00000122679 292 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm22947-201ENSMUST00000158559 91 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm5929-201ENSMUST00000166883 487 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm27155-201ENSMUST00000183716 898 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm37807-201ENSMUST00000194310 190 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm37037-201ENSMUST00000194475 424 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm18384-201ENSMUST00000195974 808 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm43070-201ENSMUST00000196938 415 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm43478-201ENSMUST00000200381 292 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm45245-201ENSMUST00000210082 376 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm36247-201ENSMUST00000211834 285 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC154594.1-201ENSMUST00000225171 1273 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC160999.1-201ENSMUST00000225675 810 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Diaph3-206ENSMUST00000226745 713 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC172751.1-201ENSMUST00000226887 440 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr480-201ENSMUST00000071658 1029 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm8074-201ENSMUST00000095071 252 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm43092-201ENSMUST00000202986 1854 ntBASIC1.8□□□□□ -2.12
Trav4-3A0A0B4J1K1 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.79□□□□□ -2.12
Trav4-3A0A0B4J1K1 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms