Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.18□□□□□ -2.06
Trav9-1A0A075B601 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm12448-201ENSMUST00000118852 655 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm14101-201ENSMUST00000121502 473 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm22651-201ENSMUST00000157872 94 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm22330-201ENSMUST00000158068 115 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm23409-201ENSMUST00000158516 237 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm17117-201ENSMUST00000163665 299 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Samd15-201ENSMUST00000169669 1194 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Snord53-201ENSMUST00000175146 78 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm27330-201ENSMUST00000184689 132 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm9931-201ENSMUST00000193584 1185 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm44208-201ENSMUST00000205199 421 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm18225-201ENSMUST00000216708 742 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm29884-201ENSMUST00000218403 453 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm23455-201ENSMUST00000083331 100 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Olfr203-201ENSMUST00000089305 924 ntBASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav9-1A0A075B601 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm22939-201ENSMUST00000103958 131 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm22115-201ENSMUST00000103976 133 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm23923-201ENSMUST00000104108 133 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm15951-201ENSMUST00000118377 400 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm14791-201ENSMUST00000119061 1166 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm14877-201ENSMUST00000119803 478 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm14881-201ENSMUST00000120366 372 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm22322-201ENSMUST00000157151 111 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm24443-201ENSMUST00000157242 132 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm17166-201ENSMUST00000172006 431 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm26991-201ENSMUST00000180950 620 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm29576-201ENSMUST00000188020 678 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm28354-201ENSMUST00000190904 678 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm7726-201ENSMUST00000206241 231 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm18557-201ENSMUST00000218710 433 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm6841-201ENSMUST00000220602 598 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 CT030194.2-201ENSMUST00000225752 379 ntBASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav9-1A0A075B601 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.06
Trav9-1A0A075B601 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.15□□□□□ -2.06
Trav9-1A0A075B601 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.15□□□□□ -2.06
Trav9-1A0A075B601 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Gm24376-201ENSMUST00000104399 127 ntBASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Gm14621-201ENSMUST00000117709 689 ntBASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Gm24787-201ENSMUST00000157380 123 ntBASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Gm17194-201ENSMUST00000164610 348 ntBASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav9-1A0A075B601 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms