Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trav1A0A075B5Z4 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.15□□□□□ -1.9
Trav1A0A075B5Z4 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm12568-201ENSMUST00000117362 624 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm12261-201ENSMUST00000117499 645 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm22208-201ENSMUST00000122658 110 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm27592-201ENSMUST00000157729 126 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm10075-201ENSMUST00000162030 545 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm5263-201ENSMUST00000163646 601 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm4540-201ENSMUST00000170669 429 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm20526-201ENSMUST00000173416 158 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm22174-201ENSMUST00000175050 125 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm22692-201ENSMUST00000175055 125 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm27634-201ENSMUST00000175060 126 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm22460-201ENSMUST00000175269 124 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm25535-201ENSMUST00000175364 125 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm24365-201ENSMUST00000175384 125 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm44310-201ENSMUST00000175424 126 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm22639-201ENSMUST00000175591 125 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm24979-201ENSMUST00000178626 126 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm27659-201ENSMUST00000183472 98 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Mir6933-201ENSMUST00000184982 81 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm27743-201ENSMUST00000185136 126 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm43841-201ENSMUST00000199491 586 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm44611-201ENSMUST00000207507 355 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm35262-201ENSMUST00000215133 267 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Snora70-201ENSMUST00000083047 137 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trav1A0A075B5Z4 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm12025-201ENSMUST00000117768 144 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm14517-201ENSMUST00000119040 337 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm14607-201ENSMUST00000119119 491 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm11404-201ENSMUST00000120872 494 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm15111-201ENSMUST00000122142 878 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm23755-201ENSMUST00000157578 343 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm24537-201ENSMUST00000157950 102 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm26141-201ENSMUST00000175299 126 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm27648-201ENSMUST00000184315 107 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm37866-201ENSMUST00000191950 696 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm5552-201ENSMUST00000197149 515 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm3010-201ENSMUST00000198805 448 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm44059-201ENSMUST00000204048 351 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.14□□□□□ -1.91
Trav1A0A075B5Z4 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms