Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm4036-201ENSMUST00000220842 626 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm24622-201ENSMUST00000082619 162 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm22265-201ENSMUST00000082947 116 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm23516-201ENSMUST00000093728 107 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim54Q9ERP3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm23691-201ENSMUST00000101878 107 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm24430-201ENSMUST00000104077 104 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm25765-201ENSMUST00000104100 132 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm14714-201ENSMUST00000119743 439 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm13720-201ENSMUST00000120741 196 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm14564-201ENSMUST00000122159 294 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm23885-201ENSMUST00000122682 294 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm26393-201ENSMUST00000157625 129 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm17155-201ENSMUST00000165969 473 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm9613-201ENSMUST00000171662 196 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Mir7658-201ENSMUST00000184043 57 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm7870-201ENSMUST00000184467 616 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm29320-201ENSMUST00000185235 615 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm29179-202ENSMUST00000186138 615 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm29448-201ENSMUST00000186675 615 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm29314-201ENSMUST00000186800 615 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm28253-202ENSMUST00000187971 615 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm29169-201ENSMUST00000189835 615 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm28552-201ENSMUST00000190725 388 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm37337-201ENSMUST00000192601 993 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm42805-201ENSMUST00000196158 276 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm18597-201ENSMUST00000209519 694 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm34779-201ENSMUST00000210036 263 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 AL935138.1-201ENSMUST00000215309 196 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm46436-201ENSMUST00000221851 1294 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm24490-201ENSMUST00000083803 98 ntBASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim54Q9ERP3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm12568-201ENSMUST00000117362 624 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm15783-201ENSMUST00000117521 633 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm12935-201ENSMUST00000119352 246 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm12335-201ENSMUST00000119738 327 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm15799-201ENSMUST00000120899 289 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm6969-201ENSMUST00000140065 342 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm23781-201ENSMUST00000157940 308 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm25748-201ENSMUST00000175487 70 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm24925-201ENSMUST00000178157 107 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm19066-201ENSMUST00000193232 1078 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Olfr713-201ENSMUST00000098139 975 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Trim54Q9ERP3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms