Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 Gm24611-201ENSMUST00000083272 107 ntBASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 Gm42736-201ENSMUST00000200723 1353 ntBASIC2.6□□□□□ -1.99
RTRAFQ9CQE8 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm5942-201ENSMUST00000120046 439 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm14939-201ENSMUST00000120347 680 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm13210-201ENSMUST00000121483 273 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm15065-201ENSMUST00000121699 273 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm14804-201ENSMUST00000122322 508 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm5963-201ENSMUST00000143451 236 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm22766-201ENSMUST00000158372 99 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm16026-202ENSMUST00000159695 772 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm27796-201ENSMUST00000183863 261 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm19637-201ENSMUST00000185933 579 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm37209-201ENSMUST00000194109 1276 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm44585-201ENSMUST00000207150 607 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm22739-201ENSMUST00000083437 160 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Gm10780-201ENSMUST00000099459 285 ntBASIC2.59□□□□□ -1.99
RTRAFQ9CQE8 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
RTRAFQ9CQE8 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
RTRAFQ9CQE8 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
RTRAFQ9CQE8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.59□□□□□ -2
RTRAFQ9CQE8 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm26423-201ENSMUST00000104277 128 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm14811-201ENSMUST00000117070 117 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm12803-201ENSMUST00000118907 821 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm11913-201ENSMUST00000119094 336 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm14607-201ENSMUST00000119119 491 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm14534-201ENSMUST00000120045 357 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm11446-201ENSMUST00000121319 866 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm15147-201ENSMUST00000122263 483 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm11506-201ENSMUST00000122414 470 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm16363-201ENSMUST00000132460 877 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm22310-201ENSMUST00000157509 116 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm3123-201ENSMUST00000163480 480 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm20701-201ENSMUST00000176082 347 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Mir6405-201ENSMUST00000184584 124 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm8296-201ENSMUST00000185597 524 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm5268-201ENSMUST00000189212 940 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm29524-201ENSMUST00000190819 699 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm37617-201ENSMUST00000194309 159 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm37791-201ENSMUST00000195081 286 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm17935-201ENSMUST00000196649 772 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm43559-201ENSMUST00000198755 466 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm43039-201ENSMUST00000202883 963 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm43897-201ENSMUST00000204019 309 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm44259-201ENSMUST00000204996 298 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm45072-201ENSMUST00000208673 929 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm9373-201ENSMUST00000208724 599 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm44548-201ENSMUST00000208929 192 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTRAFQ9CQE8 AC152415.1-201ENSMUST00000213320 440 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms