Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ccdc9Q8VC31 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm12889-201ENSMUST00000118684 241 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm11830-201ENSMUST00000120175 561 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm13574-201ENSMUST00000120482 394 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm24113-201ENSMUST00000157477 276 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm23034-201ENSMUST00000158001 147 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm23505-201ENSMUST00000158989 130 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm17109-201ENSMUST00000163985 358 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Mir6943-201ENSMUST00000185186 66 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm29064-201ENSMUST00000187014 813 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm43007-201ENSMUST00000197618 291 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm43171-201ENSMUST00000199882 291 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm4734-201ENSMUST00000200117 777 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm7726-201ENSMUST00000206241 231 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm29817-201ENSMUST00000210098 172 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm7045-201ENSMUST00000221466 605 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm24268-201ENSMUST00000082990 110 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Gm42536-201ENSMUST00000197562 1613 ntBASIC4.75□□□□□ -1.65
Ccdc9Q8VC31 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm11914-201ENSMUST00000117094 507 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm11876-201ENSMUST00000120002 269 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm13220-201ENSMUST00000121535 508 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm22107-201ENSMUST00000122548 100 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm22277-201ENSMUST00000157204 277 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm22794-201ENSMUST00000157228 306 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm21754-201ENSMUST00000177550 479 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm27315-201ENSMUST00000183977 154 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm27332-201ENSMUST00000184893 112 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm28030-201ENSMUST00000184987 138 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm23925-202ENSMUST00000188429 132 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 AC154390.1-201ENSMUST00000225629 277 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Ccdc9Q8VC31 Gm42701-201ENSMUST00000196117 1657 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm14442-201ENSMUST00000119690 1736 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm13728-201ENSMUST00000117471 400 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm13640-201ENSMUST00000118445 264 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm14687-201ENSMUST00000120206 363 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm11606-201ENSMUST00000120706 617 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm12006-201ENSMUST00000120786 403 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm23234-201ENSMUST00000157304 134 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm38149-201ENSMUST00000191943 339 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm37300-201ENSMUST00000193327 280 ntBASIC4.73□□□□□ -1.65
Ccdc9Q8VC31 Gm37050-201ENSMUST00000193464 466 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms