Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm25126-201ENSMUST00000083343 102 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.88□□□□□ -1.63
Ushbp1Q8R370 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ushbp1Q8R370 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm14835-201ENSMUST00000119039 315 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm12935-201ENSMUST00000119352 246 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm15926-201ENSMUST00000120492 550 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm11321-201ENSMUST00000121257 902 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm15946-201ENSMUST00000160654 423 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Mir5710-201ENSMUST00000176884 69 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm24897-201ENSMUST00000179033 107 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm9892-201ENSMUST00000182415 992 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm27940-201ENSMUST00000184449 98 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm28724-202ENSMUST00000194218 295 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm43586-201ENSMUST00000195948 310 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm43856-201ENSMUST00000197004 369 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm43114-201ENSMUST00000198298 343 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm44092-201ENSMUST00000204470 258 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm18602-201ENSMUST00000209794 851 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm45366-201ENSMUST00000209828 384 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 AC102369.1-201ENSMUST00000218415 373 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm24622-201ENSMUST00000082619 162 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Gm23970-201ENSMUST00000083319 107 ntBASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ushbp1Q8R370 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm15148-201ENSMUST00000117602 156 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm23781-201ENSMUST00000157940 308 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm23638-201ENSMUST00000175073 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm23158-201ENSMUST00000175076 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm22907-201ENSMUST00000175198 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm22625-201ENSMUST00000175382 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm22875-201ENSMUST00000175449 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm25197-201ENSMUST00000175516 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm27857-201ENSMUST00000176930 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm26268-201ENSMUST00000177685 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm23681-201ENSMUST00000178821 126 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm37050-201ENSMUST00000193464 466 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm42566-201ENSMUST00000197120 643 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm43975-201ENSMUST00000203023 481 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm7240-201ENSMUST00000220769 664 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm25592-201ENSMUST00000082635 131 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm23242-201ENSMUST00000083055 107 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Gm24610-201ENSMUST00000083270 109 ntBASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ushbp1Q8R370 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms