Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mir134-201ENSMUST00000083492 71 ntBASIC4.43□□□□□ -1.7
Clrn1Q8K445 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Clrn1Q8K445 Gm6177-201ENSMUST00000085589 465 ntBASIC4.43□□□□□ -1.7
Clrn1Q8K445 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Clrn1Q8K445 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Clrn1Q8K445 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Clrn1Q8K445 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Clrn1Q8K445 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm24124-201ENSMUST00000104103 132 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm12509-201ENSMUST00000118033 609 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm12852-201ENSMUST00000119478 719 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm14765-201ENSMUST00000121954 326 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm24217-201ENSMUST00000158260 133 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm25603-201ENSMUST00000158361 105 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm16038-201ENSMUST00000159317 193 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm17086-201ENSMUST00000171346 484 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Mir6363-201ENSMUST00000184880 114 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm7858-201ENSMUST00000190177 622 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm28552-201ENSMUST00000190725 388 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm5731-201ENSMUST00000190969 481 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm32447-201ENSMUST00000194265 697 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm6510-201ENSMUST00000195916 574 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm44779-201ENSMUST00000206937 708 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm18602-201ENSMUST00000209794 851 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm26228-201ENSMUST00000082512 107 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm25080-201ENSMUST00000082526 107 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm25579-201ENSMUST00000083407 106 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm25518-201ENSMUST00000083864 107 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Clrn1Q8K445 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Clrn1Q8K445 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.42□□□□□ -1.7
Clrn1Q8K445 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm22020-201ENSMUST00000104358 136 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm13064-201ENSMUST00000119125 557 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm13149-201ENSMUST00000122071 339 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm16490-201ENSMUST00000165299 351 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm20428-201ENSMUST00000174365 283 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm22355-201ENSMUST00000175531 96 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm22917-201ENSMUST00000180116 110 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm37070-201ENSMUST00000193272 460 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm44609-201ENSMUST00000207157 460 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm45344-201ENSMUST00000211610 341 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Snora52-201ENSMUST00000082732 137 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm23677-201ENSMUST00000083156 104 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.41□□□□□ -1.7
Clrn1Q8K445 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Clrn1Q8K445 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms