Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm12422-201ENSMUST00000121431 302 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm23892-201ENSMUST00000158105 130 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm20545-201ENSMUST00000174739 210 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm24464-201ENSMUST00000179697 107 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Mir6412-201ENSMUST00000184477 97 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm27997-201ENSMUST00000184942 69 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm44456-201ENSMUST00000196554 89 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm31931-201ENSMUST00000219666 222 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 AC140477.1-201ENSMUST00000222354 246 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22468-201ENSMUST00000116680 120 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm26248-201ENSMUST00000116700 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm26137-201ENSMUST00000116701 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm26190-201ENSMUST00000116704 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm24617-201ENSMUST00000116705 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm25778-201ENSMUST00000116713 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm25774-201ENSMUST00000116717 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22102-201ENSMUST00000116730 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23177-201ENSMUST00000116784 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm24193-201ENSMUST00000116801 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm24744-201ENSMUST00000116833 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm24427-201ENSMUST00000116896 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22346-201ENSMUST00000116918 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23606-201ENSMUST00000116938 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22029-201ENSMUST00000116940 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm26298-201ENSMUST00000116956 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23844-201ENSMUST00000116959 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm24484-201ENSMUST00000117009 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm25347-201ENSMUST00000117026 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22112-201ENSMUST00000117032 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm14940-201ENSMUST00000119309 495 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm13967-201ENSMUST00000120404 380 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm26278-201ENSMUST00000157098 132 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23120-201ENSMUST00000157654 287 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23855-201ENSMUST00000158377 135 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22114-201ENSMUST00000177756 107 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22991-201ENSMUST00000178126 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm25754-201ENSMUST00000178653 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm22419-201ENSMUST00000178780 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm24802-201ENSMUST00000178897 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm25208-201ENSMUST00000178964 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm24567-201ENSMUST00000179294 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23943-201ENSMUST00000179712 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm25228-201ENSMUST00000180121 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23304-201ENSMUST00000180209 121 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm27470-201ENSMUST00000184070 210 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm32340-201ENSMUST00000192883 259 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm38150-201ENSMUST00000192996 452 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm37801-201ENSMUST00000194754 274 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm19761-201ENSMUST00000205372 391 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm45002-201ENSMUST00000208045 120 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm25801-201ENSMUST00000082638 106 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23514-201ENSMUST00000082827 130 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm23460-201ENSMUST00000083258 109 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.85□□□□□ -1.47
Trim47Q8C0E3 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms