Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm29407-201ENSMUST00000191468 696 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm18964-201ENSMUST00000193013 563 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm32447-201ENSMUST00000194265 697 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm44485-201ENSMUST00000199569 137 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm6051-201ENSMUST00000201529 352 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm18116-201ENSMUST00000220920 537 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm3338-201ENSMUST00000220982 269 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm25520-201ENSMUST00000158389 118 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm22326-201ENSMUST00000158897 351 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Mir3112-201ENSMUST00000175431 82 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm23191-201ENSMUST00000179147 107 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm22951-201ENSMUST00000179471 107 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm45007-201ENSMUST00000206237 366 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm29818-201ENSMUST00000218070 165 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.52□□□□□ -1.53
Trim56Q80VI1 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim56Q80VI1 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm23709-201ENSMUST00000104364 130 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm11221-201ENSMUST00000117230 597 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm14303-201ENSMUST00000121320 171 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm14761-201ENSMUST00000121363 262 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm14977-201ENSMUST00000121626 812 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm23167-201ENSMUST00000157155 103 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm24507-201ENSMUST00000157683 134 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Mir6410-201ENSMUST00000184204 104 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm27387-201ENSMUST00000184583 116 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim56Q80VI1 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm37070-201ENSMUST00000193272 460 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm43825-201ENSMUST00000199650 734 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm42663-201ENSMUST00000199883 351 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm18100-201ENSMUST00000200897 452 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim56Q80VI1 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Trim56Q80VI1 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms