Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm11912-201ENSMUST00000117235 264 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm14469-201ENSMUST00000118363 202 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm13007-201ENSMUST00000121866 365 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm37659-201ENSMUST00000194574 111 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm18384-201ENSMUST00000195974 808 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm19177-201ENSMUST00000204520 613 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm31931-201ENSMUST00000219666 222 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm23055-201ENSMUST00000082805 94 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm14296-202ENSMUST00000108931 750 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm14838-201ENSMUST00000118913 248 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm11481-201ENSMUST00000120069 255 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm13430-201ENSMUST00000121366 288 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm12785-201ENSMUST00000122052 172 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm25106-201ENSMUST00000122672 134 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm23167-201ENSMUST00000157155 103 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm25342-201ENSMUST00000157459 122 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm26348-201ENSMUST00000157528 240 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm24784-201ENSMUST00000157640 62 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm26320-201ENSMUST00000157742 306 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm16569-201ENSMUST00000160526 314 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm16232-201ENSMUST00000162856 167 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm24713-201ENSMUST00000178850 107 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm25448-201ENSMUST00000180065 107 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm26622-201ENSMUST00000180520 298 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm18728-201ENSMUST00000186155 753 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm37338-201ENSMUST00000191986 127 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm34176-201ENSMUST00000192621 474 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm9442-201ENSMUST00000194242 319 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Gm10237-201ENSMUST00000078393 273 ntBASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cpsf6Q6NVF9 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cpsf6Q6NVF9 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cpsf6Q6NVF9 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cpsf6Q6NVF9 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.84□□□□□ -1.63
Cpsf6Q6NVF9 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cpsf6Q6NVF9 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.84□□□□□ -1.63
Cpsf6Q6NVF9 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
Cpsf6Q6NVF9 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms