Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm22219-201ENSMUST00000157562 319 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm24439-201ENSMUST00000157894 117 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm17528-201ENSMUST00000171026 239 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23523-201ENSMUST00000180190 107 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm18828-202ENSMUST00000181035 310 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm27528-201ENSMUST00000183544 205 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm28744-201ENSMUST00000189939 340 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37445-201ENSMUST00000195318 242 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm18011-201ENSMUST00000203717 565 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm19726-201ENSMUST00000205008 240 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm45730-201ENSMUST00000212560 395 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm29785-201ENSMUST00000217033 383 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm19326-201ENSMUST00000219818 326 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25139-201ENSMUST00000083247 210 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Sh3rf1Q69ZI1 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm22676-201ENSMUST00000116972 129 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm5757-201ENSMUST00000117494 528 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm6565-201ENSMUST00000121217 438 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm22037-201ENSMUST00000157280 296 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25389-201ENSMUST00000157340 286 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25384-201ENSMUST00000157807 105 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm7958-201ENSMUST00000178255 468 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm7950-201ENSMUST00000179633 468 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25156-201ENSMUST00000179809 79 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm28385-201ENSMUST00000185671 292 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm34176-201ENSMUST00000192621 474 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm5285-201ENSMUST00000193089 666 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm43393-201ENSMUST00000200147 194 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm44059-201ENSMUST00000204048 351 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm46327-201ENSMUST00000218240 365 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm5955-201ENSMUST00000222712 219 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23511-201ENSMUST00000083084 164 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Gm6361-201ENSMUST00000091031 435 ntBASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14541-201ENSMUST00000118985 157 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm16017-201ENSMUST00000119834 208 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm14619-201ENSMUST00000120480 168 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm23411-201ENSMUST00000157988 62 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm22312-201ENSMUST00000158005 130 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm25019-201ENSMUST00000179732 110 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm27688-201ENSMUST00000183634 91 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm18964-201ENSMUST00000193013 563 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm43286-201ENSMUST00000197420 424 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm42542-201ENSMUST00000197978 268 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm43975-201ENSMUST00000203023 481 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Gm7540-201ENSMUST00000219764 926 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.1□□□□□ -1.59
Sh3rf1Q69ZI1 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms