Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm24096-201ENSMUST00000103905 110 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col7a1Q63870 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm8979-201ENSMUST00000183386 7296 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm13314-201ENSMUST00000118742 335 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm15183-201ENSMUST00000118933 348 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm26928-201ENSMUST00000182674 572 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.24□□□□□ -2.05
Col7a1Q63870 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.24□□□□□ -2.05
Col7a1Q63870 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm23302-201ENSMUST00000082710 100 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col7a1Q63870 AC140397.1-201ENSMUST00000225563 4562 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm42927-201ENSMUST00000200624 3841 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Col7a1Q63870 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
Col7a1Q63870 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm11943-201ENSMUST00000119473 327 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col7a1Q63870 AC117202.1-201ENSMUST00000227007 445 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Gm17752-201ENSMUST00000185787 3726 ntBASIC2.24□□□□□ -2.05
Col7a1Q63870 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col7a1Q63870 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm28871-201ENSMUST00000186191 687 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm28057-201ENSMUST00000186603 615 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm29366-201ENSMUST00000190481 699 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm37807-201ENSMUST00000194310 190 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col7a1Q63870 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Col7a1Q63870 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm43024-201ENSMUST00000196770 4352 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Col7a1Q63870 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Col7a1Q63870 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm14823-201ENSMUST00000117698 238 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm25902-201ENSMUST00000158493 318 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm27445-201ENSMUST00000184484 72 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm44408-201ENSMUST00000200205 66 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Gm37470-201ENSMUST00000193378 2798 ntBASIC2.23□□□□□ -2.05
Col7a1Q63870 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm25094-201ENSMUST00000103992 131 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm12467-201ENSMUST00000117625 745 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm24380-201ENSMUST00000122696 324 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm25048-201ENSMUST00000158598 91 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm25836-201ENSMUST00000158918 123 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm27158-201ENSMUST00000183813 238 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm43295-201ENSMUST00000201439 412 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm45006-201ENSMUST00000206078 690 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm18453-201ENSMUST00000208000 626 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm2033-201ENSMUST00000210753 2287 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col7a1Q63870 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col7a1Q63870 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm15714-201ENSMUST00000117168 250 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm4528-201ENSMUST00000207905 551 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 CT025680.1-201ENSMUST00000217375 375 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm23927-201ENSMUST00000082466 215 ntBASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col7a1Q63870 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col7a1Q63870 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
Col7a1Q63870 Cmah-208ENSMUST00000224819 9482 ntBASIC2.21□□□□□ -2.05
Col7a1Q63870 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
Col7a1Q63870 Gm24858-201ENSMUST00000158058 323 ntBASIC2.21□□□□□ -2.05
Col7a1Q63870 Gm29657-201ENSMUST00000189807 342 ntBASIC2.21□□□□□ -2.05
Col7a1Q63870 Gm43491-201ENSMUST00000197133 784 ntBASIC2.21□□□□□ -2.05
Col7a1Q63870 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
Col7a1Q63870 AC129219.3-201ENSMUST00000223790 196 ntBASIC2.21□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms