Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim28Q62318 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Trim28Q62318 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Trim28Q62318 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Trim28Q62318 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim28Q62318 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim28Q62318 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Trim28Q62318 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim28Q62318 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim28Q62318 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim28Q62318 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim28Q62318 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Trim28Q62318 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim28Q62318 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim28Q62318 Gm7219-201ENSMUST00000119619 297 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm14638-201ENSMUST00000121338 216 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim28Q62318 Gm26173-201ENSMUST00000158416 136 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm22531-201ENSMUST00000158819 140 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim28Q62318 Gm6625-201ENSMUST00000177870 272 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Mir7093-201ENSMUST00000184195 101 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim28Q62318 Gm8939-201ENSMUST00000192577 964 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 n-TSaga9-201ENSMUST00000197675 107 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm44371-201ENSMUST00000204148 467 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Trim28Q62318 Gm2829-201ENSMUST00000213121 499 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.19□□□□□ -1.58
Trim28Q62318 AC187103.4-202ENSMUST00000225091 230 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim28Q62318 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Trim28Q62318 Gm23628-201ENSMUST00000082464 173 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Gm26108-201ENSMUST00000083973 191 ntBASIC5.19□□□□□ -1.58
Trim28Q62318 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Trim28Q62318 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.19□□□□□ -1.58
Trim28Q62318 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim28Q62318 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim28Q62318 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim28Q62318 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm26002-201ENSMUST00000101915 107 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm26384-201ENSMUST00000102183 110 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm11566-201ENSMUST00000118550 203 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm15988-201ENSMUST00000118677 367 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm8121-201ENSMUST00000153583 499 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm23112-201ENSMUST00000158606 125 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm18604-201ENSMUST00000172535 558 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm20773-201ENSMUST00000178940 681 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm6900-201ENSMUST00000178971 342 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm27964-201ENSMUST00000185195 62 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm29148-201ENSMUST00000188140 336 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm37111-201ENSMUST00000193250 634 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Mir6375-201ENSMUST00000197176 95 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm44409-201ENSMUST00000198810 166 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm5917-201ENSMUST00000217638 721 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Trim28Q62318 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim28Q62318 Gm43751-201ENSMUST00000200275 3071 ntBASIC5.18□□□□□ -1.58
Trim28Q62318 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Trim28Q62318 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC5.18□□□□□ -1.58
Trim28Q62318 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
Trim28Q62318 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim28Q62318 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Trim28Q62318 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim28Q62318 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm24581-201ENSMUST00000103962 133 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm13087-201ENSMUST00000118298 256 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm13009-201ENSMUST00000121307 267 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm11982-201ENSMUST00000121480 314 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm13368-201ENSMUST00000122443 430 ntBASIC5.17□□□□□ -1.58
Trim28Q62318 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim28Q62318 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim28Q62318 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.17□□□□□ -1.58
Trim28Q62318 Gm25058-201ENSMUST00000157365 128 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms