Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.28□□□□□ -1.72
Trim27Q62158 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Trim27Q62158 Gm43096-201ENSMUST00000196173 421 ntBASIC4.28□□□□□ -1.72
Trim27Q62158 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.28□□□□□ -1.72
Trim27Q62158 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim27Q62158 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.28□□□□□ -1.72
Trim27Q62158 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Trim27Q62158 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim27Q62158 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim27Q62158 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim27Q62158 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.28□□□□□ -1.72
Trim27Q62158 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim27Q62158 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim27Q62158 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim27Q62158 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim27Q62158 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim27Q62158 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.27□□□□□ -1.73
Trim27Q62158 Mir1193-201ENSMUST00000116761 121 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim27Q62158 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Gm25109-201ENSMUST00000122474 114 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim27Q62158 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim27Q62158 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim27Q62158 Gm23385-201ENSMUST00000158592 295 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim27Q62158 Gm18900-201ENSMUST00000193218 584 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Gm7786-201ENSMUST00000210494 436 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim27Q62158 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim27Q62158 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim27Q62158 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim27Q62158 Gm22864-201ENSMUST00000083950 130 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim27Q62158 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim27Q62158 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim27Q62158 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.27□□□□□ -1.73
Trim27Q62158 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Trim27Q62158 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim27Q62158 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim27Q62158 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim27Q62158 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim27Q62158 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm24273-201ENSMUST00000102332 164 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm12509-201ENSMUST00000118033 609 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm13603-201ENSMUST00000119404 83 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm11896-201ENSMUST00000121105 820 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm12858-201ENSMUST00000121913 208 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm22960-201ENSMUST00000122517 104 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm23167-201ENSMUST00000157155 103 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm23671-201ENSMUST00000157472 103 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm23592-201ENSMUST00000157859 117 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm23824-201ENSMUST00000158741 276 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm24520-201ENSMUST00000179510 110 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm18667-201ENSMUST00000186523 484 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm45912-201ENSMUST00000210646 543 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm17872-201ENSMUST00000222550 532 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm24611-201ENSMUST00000083272 107 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim27Q62158 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Trim27Q62158 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms