Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm25965-201ENSMUST00000157170 93 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm22766-201ENSMUST00000158372 99 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm3370-201ENSMUST00000171785 500 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm20701-201ENSMUST00000176082 347 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm27522-201ENSMUST00000183949 230 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm5268-201ENSMUST00000189212 940 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm30280-201ENSMUST00000192214 262 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm37616-201ENSMUST00000193974 322 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm37417-201ENSMUST00000195257 454 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm44354-201ENSMUST00000196017 143 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm43096-201ENSMUST00000196173 421 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm8745-201ENSMUST00000207846 782 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm18462-201ENSMUST00000208112 417 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm24626-201ENSMUST00000082621 161 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm25799-201ENSMUST00000082643 107 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm24928-201ENSMUST00000083399 107 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm25897-201ENSMUST00000083709 107 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 n-R5s54-201ENSMUST00000083837 112 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Gm25630-201ENSMUST00000084000 162 ntBASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trav3-3Q5R1C3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.59□□□□□ -2
Trav3-3Q5R1C3 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.59□□□□□ -2
Trav3-3Q5R1C3 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Trav3-3Q5R1C3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm23271-201ENSMUST00000104052 124 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm24059-201ENSMUST00000157493 312 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm26312-201ENSMUST00000157769 165 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Magea9-ps-202ENSMUST00000167328 899 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm22858-201ENSMUST00000174972 76 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm8790-201ENSMUST00000194108 322 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm43370-201ENSMUST00000196437 284 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm43967-201ENSMUST00000203787 301 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm18645-201ENSMUST00000209593 651 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm18557-201ENSMUST00000218710 433 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm8681-201ENSMUST00000219115 618 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm6776-201ENSMUST00000057752 900 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm10088-201ENSMUST00000074116 423 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm25200-201ENSMUST00000083094 130 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Trav3-3Q5R1C3 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm14299-201ENSMUST00000117586 397 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm12252-201ENSMUST00000119517 219 ntBASIC2.57□□□□□ -2
Trav3-3Q5R1C3 Gm13717-201ENSMUST00000119868 365 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms