Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Mir7226-201ENSMUST00000184953 60 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Gm2436-201ENSMUST00000219562 774 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 AC168062.3-201ENSMUST00000227025 165 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Gm23847-201ENSMUST00000083829 110 ntBASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Mir669d-201ENSMUST00000104644 121 ntBASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Gm26585-201ENSMUST00000180890 630 ntBASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Gm44319-201ENSMUST00000196974 93 ntBASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Gm8209-201ENSMUST00000206386 553 ntBASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ccdc88bQ4QRL3 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Gm22600-201ENSMUST00000157598 269 ntBASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Gm23268-201ENSMUST00000175494 78 ntBASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 AC145736.1-201ENSMUST00000214661 479 ntBASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.54□□□□□ -1.68
Ccdc88bQ4QRL3 Gm13136-201ENSMUST00000121031 2950 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gm43879-201ENSMUST00000203811 3760 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gm23803-201ENSMUST00000104610 132 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gm14843-201ENSMUST00000119596 212 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gm17063-201ENSMUST00000168135 456 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gm23162-201ENSMUST00000175081 121 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gm20718-201ENSMUST00000176058 259 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gm43264-201ENSMUST00000202284 325 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc88bQ4QRL3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Gm14448-201ENSMUST00000116383 210 ntBASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Ccdc88bQ4QRL3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Gm15302-201ENSMUST00000117779 2630 ntBASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Gm12090-201ENSMUST00000118692 758 ntBASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Gm23895-201ENSMUST00000158108 160 ntBASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Gm16318-201ENSMUST00000162402 601 ntBASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Gm17838-201ENSMUST00000205872 876 ntBASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.5□□□□□ -1.69
Ccdc88bQ4QRL3 Gm23957-201ENSMUST00000157209 90 ntBASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Gm24075-201ENSMUST00000158175 72 ntBASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Gm6850-201ENSMUST00000210031 530 ntBASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Mir99a-201ENSMUST00000083596 65 ntBASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.49□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Gm13532-201ENSMUST00000120373 240 ntBASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Gm22073-201ENSMUST00000122668 189 ntBASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Gm9890-201ENSMUST00000171867 537 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms