Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm21809-201ENSMUST00000178495 468 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm17412-201ENSMUST00000179261 468 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm28155-201ENSMUST00000191066 151 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm29523-201ENSMUST00000191415 699 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm43932-201ENSMUST00000204499 52 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm8249-201ENSMUST00000219225 465 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm8274-201ENSMUST00000219820 463 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm22829-201ENSMUST00000083771 106 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Gm26176-201ENSMUST00000083795 105 ntBASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upf3bQ3ULL6 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm24671-201ENSMUST00000104159 158 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm14987-201ENSMUST00000117820 676 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm14591-201ENSMUST00000120407 518 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm26477-201ENSMUST00000122617 323 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm23865-201ENSMUST00000157723 97 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm20672-201ENSMUST00000176605 261 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm37290-201ENSMUST00000195775 339 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm44487-201ENSMUST00000205145 325 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm20039-201ENSMUST00000210329 394 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm5175-202ENSMUST00000219699 529 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upf3bQ3ULL6 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm25647-201ENSMUST00000101832 78 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm25823-201ENSMUST00000101995 78 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm24403-201ENSMUST00000104616 130 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Mir1198-201ENSMUST00000116995 121 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm11576-201ENSMUST00000117433 417 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm15195-201ENSMUST00000118775 263 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm22208-201ENSMUST00000122658 110 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm16147-201ENSMUST00000162143 373 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm24220-201ENSMUST00000177753 79 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm25988-201ENSMUST00000177759 79 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm23471-201ENSMUST00000177886 79 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm26488-201ENSMUST00000178225 79 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm20773-201ENSMUST00000178940 681 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm23449-201ENSMUST00000179208 79 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm25221-201ENSMUST00000180051 79 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm29602-201ENSMUST00000186887 442 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm32340-201ENSMUST00000192883 259 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm9375-201ENSMUST00000208899 903 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm26129-201ENSMUST00000082719 107 ntBASIC3.34□□□□□ -1.87
Upf3bQ3ULL6 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms