Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Mir7k-201ENSMUST00000184115 110 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm43601-201ENSMUST00000196294 945 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm26379-202ENSMUST00000200225 132 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm45400-201ENSMUST00000211603 653 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf180Q3U827 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm23733-201ENSMUST00000083750 106 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm24446-201ENSMUST00000083982 156 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.16□□□□□ -1.58
Rnf180Q3U827 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf180Q3U827 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.16□□□□□ -1.58
Rnf180Q3U827 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf180Q3U827 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.15□□□□□ -1.58
Rnf180Q3U827 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.15□□□□□ -1.58
Rnf180Q3U827 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.15□□□□□ -1.58
Rnf180Q3U827 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Rnf180Q3U827 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Rnf180Q3U827 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Rnf180Q3U827 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Rnf180Q3U827 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.15□□□□□ -1.58
Rnf180Q3U827 Gm23691-201ENSMUST00000101878 107 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Mir883a-201ENSMUST00000104824 76 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm14731-201ENSMUST00000119216 376 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm12900-201ENSMUST00000120919 573 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm6486-201ENSMUST00000166202 434 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm29216-201ENSMUST00000187117 492 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.15□□□□□ -1.59
Rnf180Q3U827 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf180Q3U827 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm20304-201ENSMUST00000218168 444 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 AC132465.3-201ENSMUST00000219326 195 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm26439-201ENSMUST00000082592 106 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Rnf180Q3U827 AC173482.1-201ENSMUST00000224494 3815 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.15□□□□□ -1.59
Rnf180Q3U827 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm14903-201ENSMUST00000122435 537 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm25163-201ENSMUST00000158905 104 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Mir6393-201ENSMUST00000183709 94 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm37353-201ENSMUST00000194497 313 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm44125-201ENSMUST00000203068 448 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm24622-201ENSMUST00000082619 162 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm25578-201ENSMUST00000083406 104 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.14□□□□□ -1.59
Rnf180Q3U827 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.13□□□□□ -1.59
Rnf180Q3U827 Gm23532-201ENSMUST00000104569 112 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms