Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Cux1P53564 Gm29407-201ENSMUST00000191468 696 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Gm2719-201ENSMUST00000191929 444 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC4.15□□□□□ -1.75
Cux1P53564 Gm44161-201ENSMUST00000203532 253 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Gm45200-201ENSMUST00000207434 919 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.15□□□□□ -1.75
Cux1P53564 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.15□□□□□ -1.75
Cux1P53564 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Cux1P53564 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cux1P53564 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Cux1P53564 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.14□□□□□ -1.75
Cux1P53564 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Cux1P53564 Gm650-201ENSMUST00000144428 1551 ntBASIC4.14□□□□□ -1.75
Cux1P53564 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cux1P53564 Gm14593-201ENSMUST00000119948 294 ntBASIC4.14□□□□□ -1.75
Cux1P53564 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cux1P53564 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Cux1P53564 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Cux1P53564 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.14□□□□□ -1.75
Cux1P53564 Gm44844-201ENSMUST00000207242 336 ntBASIC4.14□□□□□ -1.75
Cux1P53564 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.14□□□□□ -1.75
Cux1P53564 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Cux1P53564 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.13□□□□□ -1.75
Cux1P53564 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Cux1P53564 Gm22752-201ENSMUST00000102083 109 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Gm24670-201ENSMUST00000104154 132 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cux1P53564 Gm14385-201ENSMUST00000116315 876 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cux1P53564 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cux1P53564 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cux1P53564 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Gm25476-201ENSMUST00000175125 185 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cux1P53564 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Cux1P53564 Gm14527-201ENSMUST00000179300 639 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Cux1P53564 AL603834.1-201ENSMUST00000198372 121 ntBASIC4.13□□□□□ -1.75
Cux1P53564 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.13□□□□□ -1.75
Cux1P53564 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Cux1P53564 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Cux1P53564 Gm44715-201ENSMUST00000209049 3839 ntBASIC4.12□□□□□ -1.75
Cux1P53564 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.12□□□□□ -1.75
Cux1P53564 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cux1P53564 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cux1P53564 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.12□□□□□ -1.75
Cux1P53564 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.12□□□□□ -1.75
Cux1P53564 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC4.12□□□□□ -1.75
Cux1P53564 Gm23895-201ENSMUST00000158108 160 ntBASIC4.12□□□□□ -1.75
Cux1P53564 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.12□□□□□ -1.75
Cux1P53564 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cux1P53564 Gm18698-201ENSMUST00000192327 668 ntBASIC4.12□□□□□ -1.75
Cux1P53564 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.12□□□□□ -1.75
Cux1P53564 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Cux1P53564 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Cux1P53564 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Cux1P53564 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cux1P53564 AC117199.1-201ENSMUST00000219940 3132 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Gm6574-201ENSMUST00000120037 362 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Gm14655-201ENSMUST00000120124 578 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Gm12617-201ENSMUST00000121268 381 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Gm24465-201ENSMUST00000178398 107 ntBASIC4.11□□□□□ -1.75
Cux1P53564 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cux1P53564 Gm43104-201ENSMUST00000197234 311 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.11□□□□□ -1.75
Cux1P53564 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.11□□□□□ -1.75
Cux1P53564 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cux1P53564 Gm25202-201ENSMUST00000082838 191 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Gm22622-201ENSMUST00000082870 129 ntBASIC4.11□□□□□ -1.75
Cux1P53564 AC122850.1-201ENSMUST00000220380 5690 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Cux1P53564 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Cux1P53564 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Cux1P53564 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Cux1P53564 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Cux1P53564 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.11□□□□□ -1.75
Cux1P53564 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cux1P53564 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.11□□□□□ -1.75
Cux1P53564 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Cux1P53564 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.11□□□□□ -1.75
Cux1P53564 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.11□□□□□ -1.75
Cux1P53564 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Cux1P53564 Gm23738-201ENSMUST00000082828 171 ntBASIC4.11□□□□□ -1.75
Cux1P53564 Gm4017-201ENSMUST00000084813 338 ntBASIC4.11□□□□□ -1.75
Cux1P53564 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.1□□□□□ -1.75
Cux1P53564 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cux1P53564 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cux1P53564 Gm11943-201ENSMUST00000119473 327 ntBASIC4.1□□□□□ -1.75
Cux1P53564 Gm12001-201ENSMUST00000121727 913 ntBASIC4.1□□□□□ -1.75
Cux1P53564 Gm24937-201ENSMUST00000122597 134 ntBASIC4.1□□□□□ -1.75
Cux1P53564 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC4.1□□□□□ -1.75
Cux1P53564 Gm16236-201ENSMUST00000159588 379 ntBASIC4.1□□□□□ -1.75
Cux1P53564 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cux1P53564 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.1□□□□□ -1.75
Cux1P53564 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.1□□□□□ -1.75
Cux1P53564 Gm37377-201ENSMUST00000191733 304 ntBASIC4.1□□□□□ -1.75
Cux1P53564 Gm8209-201ENSMUST00000206386 553 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms