Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25157-201ENSMUST00000178914 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm23313-201ENSMUST00000178931 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l17-201ENSMUST00000178936 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm23089-201ENSMUST00000178947 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22046-201ENSMUST00000179027 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l10-201ENSMUST00000179053 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm24153-201ENSMUST00000179280 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm25597-201ENSMUST00000179388 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l1-201ENSMUST00000179518 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22941-201ENSMUST00000179630 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm25816-201ENSMUST00000179764 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l14-201ENSMUST00000179875 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l8-201ENSMUST00000179889 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l7-201ENSMUST00000179895 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l5-201ENSMUST00000179927 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l6-201ENSMUST00000179955 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26188-201ENSMUST00000179963 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm25471-201ENSMUST00000180126 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm26433-201ENSMUST00000180227 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Snord116l11-201ENSMUST00000180312 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm23862-201ENSMUST00000180342 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm22128-201ENSMUST00000180346 94 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Mir6416-201ENSMUST00000183664 117 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.78□□□□□ -1.48
Rfx1P48377 Gm28660-201ENSMUST00000186496 253 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm28625-201ENSMUST00000188309 205 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm38131-201ENSMUST00000192449 430 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm9332-201ENSMUST00000198431 730 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 Gm44794-201ENSMUST00000206550 411 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.78□□□□□ -1.48
Rfx1P48377 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Rfx1P48377 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Rfx1P48377 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.78□□□□□ -1.48
Rfx1P48377 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rfx1P48377 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.77□□□□□ -1.49
Rfx1P48377 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm23577-201ENSMUST00000103950 110 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm13321-201ENSMUST00000117101 400 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rfx1P48377 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm23169-201ENSMUST00000157157 112 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm25906-201ENSMUST00000158489 126 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm21978-201ENSMUST00000179696 377 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm29231-201ENSMUST00000179850 319 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm26701-201ENSMUST00000181571 234 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rfx1P48377 Mir6400-201ENSMUST00000184870 92 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm29365-201ENSMUST00000189461 699 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm36934-201ENSMUST00000192007 306 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm18854-201ENSMUST00000211196 329 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.77□□□□□ -1.49
Rfx1P48377 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 AC123618.1-201ENSMUST00000220174 360 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm23851-201ENSMUST00000083831 103 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm6043-201ENSMUST00000099961 492 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm17976-201ENSMUST00000184037 1909 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Rfx1P48377 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.77□□□□□ -1.49
Rfx1P48377 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.77□□□□□ -1.49
Rfx1P48377 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rfx1P48377 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Rfx1P48377 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rfx1P48377 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Rfx1P48377 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rfx1P48377 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rfx1P48377 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm11625-201ENSMUST00000119535 296 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm16179-201ENSMUST00000120685 373 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm13132-201ENSMUST00000121194 472 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm11200-201ENSMUST00000121698 448 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm22343-201ENSMUST00000122648 286 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms