Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm15333-201ENSMUST00000118825 364 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm12803-201ENSMUST00000118907 821 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm15231-201ENSMUST00000119174 447 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm14655-201ENSMUST00000120124 578 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm12095-201ENSMUST00000121962 816 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm25292-201ENSMUST00000122797 322 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm2020-201ENSMUST00000145242 579 ntBASIC4.5□□□□□ -1.69
LdlrP35951 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LdlrP35951 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 Gm27660-201ENSMUST00000184028 208 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm28830-201ENSMUST00000188192 213 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm28625-201ENSMUST00000188309 205 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm29196-201ENSMUST00000189239 618 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LdlrP35951 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.5□□□□□ -1.69
LdlrP35951 Gm3867-201ENSMUST00000086108 279 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LdlrP35951 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LdlrP35951 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LdlrP35951 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LdlrP35951 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LdlrP35951 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.5□□□□□ -1.69
LdlrP35951 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LdlrP35951 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.49□□□□□ -1.69
LdlrP35951 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
LdlrP35951 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
LdlrP35951 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.49□□□□□ -1.69
LdlrP35951 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LdlrP35951 Gm14001-201ENSMUST00000118847 247 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm12231-201ENSMUST00000119447 695 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm13804-201ENSMUST00000119552 172 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm5942-201ENSMUST00000120046 439 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm11448-201ENSMUST00000120427 450 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm13009-201ENSMUST00000121307 267 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm25784-201ENSMUST00000122524 81 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm22563-201ENSMUST00000157333 269 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm25706-201ENSMUST00000157828 247 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm23068-201ENSMUST00000158239 293 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.49□□□□□ -1.69
LdlrP35951 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Gm22177-201ENSMUST00000175002 158 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm24306-201ENSMUST00000180229 79 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm26828-201ENSMUST00000180640 172 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Gm5058-201ENSMUST00000187331 463 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm37313-201ENSMUST00000191673 290 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.49□□□□□ -1.69
LdlrP35951 Gm43441-201ENSMUST00000201458 205 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm44389-201ENSMUST00000203795 182 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm8319-201ENSMUST00000205708 641 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm29754-201ENSMUST00000206269 358 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
LdlrP35951 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm45375-201ENSMUST00000210338 280 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm45588-201ENSMUST00000211213 630 ntBASIC4.49□□□□□ -1.69
LdlrP35951 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Gm17779-201ENSMUST00000213395 394 ntBASIC4.49□□□□□ -1.69
LdlrP35951 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.49□□□□□ -1.69
LdlrP35951 Gm18696-201ENSMUST00000220103 274 ntBASIC4.49□□□□□ -1.69
LdlrP35951 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.49□□□□□ -1.69
LdlrP35951 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.49□□□□□ -1.69
LdlrP35951 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LdlrP35951 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LdlrP35951 Gm26206-201ENSMUST00000082908 110 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm23733-201ENSMUST00000083750 106 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Gm22365-201ENSMUST00000093750 117 ntBASIC4.49□□□□□ -1.69
LdlrP35951 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LdlrP35951 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LdlrP35951 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
LdlrP35951 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LdlrP35951 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LdlrP35951 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LdlrP35951 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.48□□□□□ -1.69
LdlrP35951 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LdlrP35951 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.48□□□□□ -1.69
LdlrP35951 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.48□□□□□ -1.69
LdlrP35951 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.48□□□□□ -1.69
LdlrP35951 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LdlrP35951 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LdlrP35951 Gm24124-201ENSMUST00000104103 132 ntBASIC4.48□□□□□ -1.69
LdlrP35951 Gm23594-201ENSMUST00000104307 134 ntBASIC4.48□□□□□ -1.69
LdlrP35951 Mir105-201ENSMUST00000104655 80 ntBASIC4.48□□□□□ -1.69
LdlrP35951 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.48□□□□□ -1.69
LdlrP35951 Gm15010-201ENSMUST00000117153 407 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms