Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm44554-201ENSMUST00000208738 147 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col2a1P28481 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.33□□□□□ -1.88
Col2a1P28481 Diaph3-206ENSMUST00000226745 713 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col2a1P28481 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col2a1P28481 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Col2a1P28481 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col2a1P28481 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col2a1P28481 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.33□□□□□ -1.88
Col2a1P28481 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col2a1P28481 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col2a1P28481 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col2a1P28481 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Col2a1P28481 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col2a1P28481 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col2a1P28481 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col2a1P28481 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm25466-201ENSMUST00000103995 132 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.32□□□□□ -1.88
Col2a1P28481 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm13581-201ENSMUST00000120675 278 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm14876-201ENSMUST00000120795 327 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm22849-201ENSMUST00000157713 307 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm24358-201ENSMUST00000158424 288 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm3370-201ENSMUST00000171785 500 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm23633-201ENSMUST00000175293 119 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm37433-201ENSMUST00000192695 678 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm37007-201ENSMUST00000194234 319 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm37441-201ENSMUST00000194430 678 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col2a1P28481 AC159819.1-201ENSMUST00000213911 328 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 AC131743.3-201ENSMUST00000222099 662 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gm18441-201ENSMUST00000223539 617 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col2a1P28481 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col2a1P28481 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.32□□□□□ -1.88
Col2a1P28481 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col2a1P28481 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col2a1P28481 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col2a1P28481 Gm9078-201ENSMUST00000119126 617 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Gm24937-201ENSMUST00000122597 134 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col2a1P28481 Gm22698-201ENSMUST00000175375 108 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Gm18698-201ENSMUST00000192327 668 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.31□□□□□ -1.88
Col2a1P28481 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.31□□□□□ -1.88
Col2a1P28481 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col2a1P28481 Olfr844-201ENSMUST00000054106 930 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Gm7204-201ENSMUST00000062591 600 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col2a1P28481 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col2a1P28481 Mir21a-201ENSMUST00000083521 92 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col2a1P28481 Gm650-201ENSMUST00000144428 1551 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.31□□□□□ -1.88
Col2a1P28481 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col2a1P28481 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col2a1P28481 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.3□□□□□ -1.88
Col2a1P28481 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col2a1P28481 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm17166-201ENSMUST00000172006 431 ntBASIC3.3□□□□□ -1.88
Col2a1P28481 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm42593-201ENSMUST00000198469 377 ntBASIC3.3□□□□□ -1.88
Col2a1P28481 Gm43992-201ENSMUST00000204358 197 ntBASIC3.3□□□□□ -1.88
Col2a1P28481 Gm10297-201ENSMUST00000207136 651 ntBASIC3.3□□□□□ -1.88
Col2a1P28481 Gm18602-201ENSMUST00000209794 851 ntBASIC3.3□□□□□ -1.88
Col2a1P28481 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col2a1P28481 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col2a1P28481 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col2a1P28481 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col2a1P28481 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Col2a1P28481 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col2a1P28481 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col2a1P28481 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.29□□□□□ -1.88
Col2a1P28481 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col2a1P28481 Gm15161-201ENSMUST00000117340 387 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm11433-201ENSMUST00000118318 228 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm12090-201ENSMUST00000118692 758 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm23213-201ENSMUST00000122715 313 ntBASIC3.29□□□□□ -1.88
Col2a1P28481 Gm24443-201ENSMUST00000157242 132 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms