Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm24120-201ENSMUST00000103978 129 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Sdc1P18828 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm13717-201ENSMUST00000119868 365 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm11252-201ENSMUST00000120572 939 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm25965-201ENSMUST00000157170 93 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm23671-201ENSMUST00000157472 103 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm23501-201ENSMUST00000157744 256 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm24850-201ENSMUST00000158029 119 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm25902-201ENSMUST00000158493 318 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm25026-201ENSMUST00000175017 188 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm20612-201ENSMUST00000176318 236 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Mir7056-201ENSMUST00000183776 59 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm36934-201ENSMUST00000192007 306 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm38046-201ENSMUST00000192733 550 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm29740-201ENSMUST00000193182 655 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm18433-202ENSMUST00000195682 196 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm9632-201ENSMUST00000195934 643 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm42832-201ENSMUST00000196361 745 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm44030-201ENSMUST00000204865 432 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm18410-201ENSMUST00000207199 577 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm44548-201ENSMUST00000208929 192 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Gm5655-201ENSMUST00000221078 901 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 AC164883.9-201ENSMUST00000228042 399 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Sdc1P18828 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Sdc1P18828 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.8□□□□□ -1.96
Sdc1P18828 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Sdc1P18828 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Sdc1P18828 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Sdc1P18828 Gm13731-201ENSMUST00000117332 196 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm12782-201ENSMUST00000117519 727 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm15988-201ENSMUST00000118677 367 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Sdc1P18828 Gm14939-201ENSMUST00000120347 680 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm22339-201ENSMUST00000157718 62 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Nron-204ENSMUST00000158971 370 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm20397-201ENSMUST00000174520 362 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm20399-201ENSMUST00000174652 132 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Sdc1P18828 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Sdc1P18828 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Sdc1P18828 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 Mir6414-201ENSMUST00000183685 82 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Sdc1P18828 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC2.79□□□□□ -1.96
Sdc1P18828 Gm6929-201ENSMUST00000210930 468 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 AC144798.1-201ENSMUST00000228120 391 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm23939-201ENSMUST00000082880 133 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Mir26a-2-201ENSMUST00000083496 84 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm23102-201ENSMUST00000083724 116 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm22826-201ENSMUST00000083774 165 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Sdc1P18828 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Sdc1P18828 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Sdc1P18828 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Sdc1P18828 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Sdc1P18828 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.79□□□□□ -1.96
Sdc1P18828 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.78□□□□□ -1.96
Sdc1P18828 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Sdc1P18828 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Sdc1P18828 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Sdc1P18828 Gm26145-201ENSMUST00000104476 127 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms