Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col1a1P11087 Gm29335-201ENSMUST00000188361 459 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm38166-201ENSMUST00000191660 471 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm38356-201ENSMUST00000194313 408 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm43476-201ENSMUST00000197873 405 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm43393-201ENSMUST00000200147 194 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm44519-201ENSMUST00000206486 122 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.22□□□□□ -1.89
Col1a1P11087 Mir99a-201ENSMUST00000083596 65 ntBASIC3.22□□□□□ -1.89
Col1a1P11087 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col1a1P11087 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col1a1P11087 Gm13329-201ENSMUST00000117063 265 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 Gm14890-201ENSMUST00000117660 676 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 Gm6574-201ENSMUST00000120037 362 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 Gm11387-201ENSMUST00000120266 772 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col1a1P11087 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col1a1P11087 Gm1833-201ENSMUST00000191608 682 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 Gm45551-201ENSMUST00000211459 928 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.21□□□□□ -1.9
Col1a1P11087 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col1a1P11087 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col1a1P11087 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col1a1P11087 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col1a1P11087 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col1a1P11087 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col1a1P11087 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col1a1P11087 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.2□□□□□ -1.9
Col1a1P11087 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col1a1P11087 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC3.2□□□□□ -1.9
Col1a1P11087 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col1a1P11087 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.2□□□□□ -1.9
Col1a1P11087 Gm23957-201ENSMUST00000157209 90 ntBASIC3.2□□□□□ -1.9
Col1a1P11087 Gm18558-201ENSMUST00000186253 1214 ntBASIC3.2□□□□□ -1.9
Col1a1P11087 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.2□□□□□ -1.9
Col1a1P11087 Gm45474-201ENSMUST00000209471 408 ntBASIC3.2□□□□□ -1.9
Col1a1P11087 Gm45252-201ENSMUST00000211579 397 ntBASIC3.2□□□□□ -1.9
Col1a1P11087 Gm26458-201ENSMUST00000082832 128 ntBASIC3.2□□□□□ -1.9
Col1a1P11087 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col1a1P11087 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col1a1P11087 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.2□□□□□ -1.9
Col1a1P11087 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Col1a1P11087 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col1a1P11087 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm24120-201ENSMUST00000103978 129 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm14385-201ENSMUST00000116315 876 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm8260-201ENSMUST00000119230 353 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm13532-201ENSMUST00000120373 240 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm13511-201ENSMUST00000121167 363 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm16236-201ENSMUST00000159588 379 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm8580-201ENSMUST00000160295 464 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col1a1P11087 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 Gm7117-201ENSMUST00000071515 387 ntBASIC3.19□□□□□ -1.9
Col1a1P11087 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.19□□□□□ -1.9
Col1a1P11087 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col1a1P11087 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col1a1P11087 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col1a1P11087 Gm23011-201ENSMUST00000104148 132 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Gm23889-201ENSMUST00000122689 104 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.18□□□□□ -1.9
Col1a1P11087 Gm22651-201ENSMUST00000157872 94 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Gm22534-201ENSMUST00000158173 104 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Gm24876-201ENSMUST00000158780 92 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col1a1P11087 Gm43704-201ENSMUST00000196164 496 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col1a1P11087 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Gm9762-201ENSMUST00000036976 444 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Col1a1P11087 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col1a1P11087 Snora23-201ENSMUST00000082517 184 ntBASIC3.18□□□□□ -1.9
Col1a1P11087 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.17□□□□□ -1.9
Col1a1P11087 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col1a1P11087 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Col1a1P11087 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.17□□□□□ -1.9
Col1a1P11087 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.17□□□□□ -1.9
Col1a1P11087 Gm25048-201ENSMUST00000158598 91 ntBASIC3.17□□□□□ -1.9
Col1a1P11087 Gm17063-201ENSMUST00000168135 456 ntBASIC3.17□□□□□ -1.9
Col1a1P11087 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.17□□□□□ -1.9
Col1a1P11087 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Col1a1P11087 Gm43384-201ENSMUST00000200569 637 ntBASIC3.17□□□□□ -1.9
Col1a1P11087 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms