Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm9427-201ENSMUST00000116187 651 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm26247-201ENSMUST00000116702 91 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm14627-201ENSMUST00000118931 567 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm3757-201ENSMUST00000125878 675 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC2.7□□□□□ -1.98
Col5a1O88207 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm15275-201ENSMUST00000154752 347 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm24443-201ENSMUST00000157242 132 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm24690-201ENSMUST00000157759 97 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm3370-201ENSMUST00000171785 500 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col5a1O88207 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.7□□□□□ -1.98
Col5a1O88207 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm28724-202ENSMUST00000194218 295 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm9472-201ENSMUST00000221625 526 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Col5a1O88207 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm3623-201ENSMUST00000173643 2747 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm37393-201ENSMUST00000195118 3870 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col5a1O88207 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm20450-201ENSMUST00000173652 147 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm20660-201ENSMUST00000177515 289 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm28900-201ENSMUST00000185232 156 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm29330-201ENSMUST00000190032 699 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC2.7□□□□□ -1.98
Col5a1O88207 Gm28098-201ENSMUST00000191361 699 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm37684-201ENSMUST00000192779 355 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm44521-201ENSMUST00000206469 217 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Col5a1O88207 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 AC153522.1-201ENSMUST00000220047 1090 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm7646-201ENSMUST00000198590 1346 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC2.7□□□□□ -1.98
Col5a1O88207 Gm42968-201ENSMUST00000198578 1372 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col5a1O88207 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col5a1O88207 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm12401-201ENSMUST00000118435 228 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col5a1O88207 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm13460-201ENSMUST00000121274 353 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm16274-201ENSMUST00000139251 592 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm24213-201ENSMUST00000158255 258 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC2.69□□□□□ -1.98
Col5a1O88207 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Col5a1O88207 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm29610-201ENSMUST00000187749 453 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm37111-201ENSMUST00000193250 634 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm45078-201ENSMUST00000205343 546 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm45013-201ENSMUST00000206883 178 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm4017-201ENSMUST00000084813 338 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Col5a1O88207 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col5a1O88207 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col5a1O88207 Gm37899-201ENSMUST00000193116 8717 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.69□□□□□ -1.98
Col5a1O88207 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col5a1O88207 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Col5a1O88207 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm14876-201ENSMUST00000120795 327 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm11414-201ENSMUST00000121795 263 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm23213-201ENSMUST00000122715 313 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm19203-201ENSMUST00000174049 939 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm25360-201ENSMUST00000178786 191 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Mrgprb13-201ENSMUST00000188191 985 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm37353-201ENSMUST00000194497 313 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm34314-201ENSMUST00000203622 367 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Gm7588-201ENSMUST00000216866 571 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC2.68□□□□□ -1.98
Col5a1O88207 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col5a1O88207 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col5a1O88207 Gm26063-201ENSMUST00000083378 107 ntBASIC2.68□□□□□ -1.98
Col5a1O88207 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms