Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm4487-201ENSMUST00000150617 442 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm26028-201ENSMUST00000158660 294 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm6486-201ENSMUST00000166202 434 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm7094-201ENSMUST00000178379 366 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm20773-201ENSMUST00000178940 681 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Mir6541-201ENSMUST00000183649 110 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm9722-201ENSMUST00000194568 802 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm43925-201ENSMUST00000203498 206 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm5876-201ENSMUST00000203735 243 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm45048-201ENSMUST00000207058 429 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm7786-201ENSMUST00000210494 436 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm18644-201ENSMUST00000211458 815 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm23614-201ENSMUST00000082598 107 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm23423-201ENSMUST00000082782 106 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm23093-201ENSMUST00000083450 102 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Shisa8J3QNX5 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm24117-201ENSMUST00000103973 133 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm22020-201ENSMUST00000104358 136 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm15206-201ENSMUST00000119143 454 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm14875-201ENSMUST00000120881 319 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm3362-201ENSMUST00000148102 466 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm26312-201ENSMUST00000157769 165 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm25555-201ENSMUST00000158078 111 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm17109-201ENSMUST00000163985 358 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm21960-201ENSMUST00000181924 452 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm28146-201ENSMUST00000185517 701 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm28574-201ENSMUST00000185757 699 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm28397-201ENSMUST00000187970 699 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm28151-201ENSMUST00000189404 951 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm29366-201ENSMUST00000190481 699 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm38098-201ENSMUST00000194115 241 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm36954-201ENSMUST00000195362 363 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm37119-201ENSMUST00000195691 389 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm42475-201ENSMUST00000201212 295 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm44125-201ENSMUST00000203068 448 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm9616-201ENSMUST00000221154 781 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Ap3m1-208ENSMUST00000224016 764 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm23378-201ENSMUST00000082942 107 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Gm23455-201ENSMUST00000083331 100 ntBASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Shisa8J3QNX5 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms