Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm24144-201ENSMUST00000082632 111 ntBASIC3.39□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Smarcb1Q9Z0H3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Smarcb1Q9Z0H3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Smarcb1Q9Z0H3 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Smarcb1Q9Z0H3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm22023-201ENSMUST00000104354 130 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm11576-201ENSMUST00000117433 417 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm11708-201ENSMUST00000119530 832 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm15244-201ENSMUST00000121122 130 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm22722-201ENSMUST00000157467 132 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm24965-201ENSMUST00000157922 106 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm22833-201ENSMUST00000158292 132 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm9890-201ENSMUST00000171867 537 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29105-201ENSMUST00000187256 450 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29525-201ENSMUST00000189844 699 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29523-201ENSMUST00000191415 699 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm19987-201ENSMUST00000216339 499 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Smarcb1Q9Z0H3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm13761-201ENSMUST00000117238 807 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm12880-201ENSMUST00000120652 494 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm8840-201ENSMUST00000122454 386 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm16490-201ENSMUST00000165299 351 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm18415-201ENSMUST00000177464 647 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm18486-201ENSMUST00000184040 298 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm7870-201ENSMUST00000184467 616 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm18406-201ENSMUST00000185872 669 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29534-201ENSMUST00000187328 382 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm43090-201ENSMUST00000202459 314 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm44594-201ENSMUST00000208982 407 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm22979-201ENSMUST00000082609 159 ntBASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Smarcb1Q9Z0H3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm13122-201ENSMUST00000118380 453 ntBASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm23860-201ENSMUST00000179446 132 ntBASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28146-201ENSMUST00000185517 701 ntBASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Smarcb1Q9Z0H3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms