Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm46233-201ENSMUST00000217831 449 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Snord21-201ENSMUST00000082519 94 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm22444-201ENSMUST00000093693 108 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Scn5aQ9JJV9 Gm23942-201ENSMUST00000101956 107 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm12788-201ENSMUST00000119090 308 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm7071-201ENSMUST00000120458 462 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm11260-201ENSMUST00000121163 942 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm6947-201ENSMUST00000186254 78 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm43975-201ENSMUST00000203023 481 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm15382-201ENSMUST00000118011 537 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm6565-201ENSMUST00000121217 438 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm3123-201ENSMUST00000163480 480 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm28625-201ENSMUST00000188309 205 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm21006-201ENSMUST00000196930 667 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm45189-201ENSMUST00000208567 363 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm9375-201ENSMUST00000208899 903 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm45735-201ENSMUST00000212779 319 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm6462-201ENSMUST00000081488 304 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm25004-201ENSMUST00000083811 161 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Scn5aQ9JJV9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Mir804-201ENSMUST00000103251 95 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm26387-201ENSMUST00000104238 132 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm14926-201ENSMUST00000120650 508 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm18415-201ENSMUST00000177464 647 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm25120-201ENSMUST00000180148 79 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm19599-201ENSMUST00000218898 358 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 AC131743.3-201ENSMUST00000222099 662 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm13167-201ENSMUST00000118554 578 ntBASIC3.36□□□□□ -1.87
Scn5aQ9JJV9 Gm11843-201ENSMUST00000118984 425 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms