Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm24886-201ENSMUST00000104384 123 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm12303-201ENSMUST00000119506 673 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm6175-201ENSMUST00000121351 400 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm13430-201ENSMUST00000121366 288 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm12732-201ENSMUST00000121688 180 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm15213-201ENSMUST00000122098 216 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm26320-201ENSMUST00000157742 306 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm23280-201ENSMUST00000157905 139 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm26170-201ENSMUST00000158419 148 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm8214-201ENSMUST00000172123 351 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm28640-201ENSMUST00000190918 550 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm37568-201ENSMUST00000191755 364 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm37732-201ENSMUST00000194377 316 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm19060-201ENSMUST00000201959 421 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm44059-201ENSMUST00000204048 351 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm44513-201ENSMUST00000206811 439 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Mir143-201ENSMUST00000083511 63 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim39Q9ESN2 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm14296-202ENSMUST00000108931 750 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm22953-201ENSMUST00000116724 101 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm22959-201ENSMUST00000122514 303 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm23233-201ENSMUST00000157301 137 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm24731-201ENSMUST00000158227 131 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm3191-201ENSMUST00000167139 346 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm20660-201ENSMUST00000177515 289 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm9320-201ENSMUST00000184151 473 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm27679-201ENSMUST00000184612 84 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm36934-201ENSMUST00000192007 306 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm37692-201ENSMUST00000192633 232 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Igkv13-64-201ENSMUST00000198143 343 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm46223-201ENSMUST00000215196 675 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm22973-201ENSMUST00000083298 191 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm26329-201ENSMUST00000093723 110 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.06□□□□□ -1.6
Trim39Q9ESN2 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Trim39Q9ESN2 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms