Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm10025-201ENSMUST00000079568 372 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Cpsf1Q9EPU4 Gm23128-201ENSMUST00000104257 132 ntBASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Gm13024-201ENSMUST00000121756 718 ntBASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Gm27379-201ENSMUST00000183730 123 ntBASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Gm23128-202ENSMUST00000196578 133 ntBASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Gm42593-201ENSMUST00000198469 377 ntBASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cpsf1Q9EPU4 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm15195-201ENSMUST00000118775 263 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm12515-201ENSMUST00000120116 361 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm9587-201ENSMUST00000172449 454 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm20656-201ENSMUST00000176925 518 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cpsf1Q9EPU4 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Gm25808-201ENSMUST00000122784 284 ntBASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Gm16111-201ENSMUST00000162128 285 ntBASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Mir7013-201ENSMUST00000183540 72 ntBASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cpsf1Q9EPU4 Gm11456-201ENSMUST00000121070 256 ntBASIC3.85□□□□□ -1.79
Cpsf1Q9EPU4 Gm8880-201ENSMUST00000121800 454 ntBASIC3.85□□□□□ -1.79
Cpsf1Q9EPU4 Gm24780-201ENSMUST00000157635 143 ntBASIC3.85□□□□□ -1.79
Cpsf1Q9EPU4 Gm23895-201ENSMUST00000158108 160 ntBASIC3.85□□□□□ -1.79
Cpsf1Q9EPU4 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf1Q9EPU4 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cpsf1Q9EPU4 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.85□□□□□ -1.79
Cpsf1Q9EPU4 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm24890-201ENSMUST00000104389 102 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm23803-201ENSMUST00000104610 132 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm16569-201ENSMUST00000160526 314 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm8242-202ENSMUST00000193056 475 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm3933-201ENSMUST00000195391 439 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm2436-201ENSMUST00000219562 774 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 AC173482.3-201ENSMUST00000225492 1212 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Cpsf1Q9EPU4 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Cpsf1Q9EPU4 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm11446-201ENSMUST00000121319 866 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm13471-201ENSMUST00000122057 433 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm14562-201ENSMUST00000129885 543 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm7582-201ENSMUST00000160831 603 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm28146-201ENSMUST00000185517 701 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm37807-201ENSMUST00000194310 190 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm19080-201ENSMUST00000196082 550 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.83□□□□□ -1.8
Cpsf1Q9EPU4 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms