Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc3Q9D6Y1 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15190-201ENSMUST00000120855 276 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm16021-201ENSMUST00000121176 219 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm14389-201ENSMUST00000140453 241 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm22722-201ENSMUST00000157467 132 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm22833-201ENSMUST00000158292 132 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm23583-201ENSMUST00000158533 289 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28282-201ENSMUST00000186072 186 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm37288-201ENSMUST00000193963 334 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ccdc3Q9D6Y1 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm24119-201ENSMUST00000103979 246 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm12515-201ENSMUST00000120116 361 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15019-201ENSMUST00000120148 434 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm6265-201ENSMUST00000149263 231 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm22532-201ENSMUST00000158822 140 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm27783-201ENSMUST00000183534 105 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm37431-201ENSMUST00000195102 111 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm23136-201ENSMUST00000083425 99 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.12□□□□□ -1.91
Ccdc3Q9D6Y1 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm24541-201ENSMUST00000103871 96 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm13761-201ENSMUST00000117238 807 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15951-201ENSMUST00000118377 400 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm12739-201ENSMUST00000119769 382 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm25373-201ENSMUST00000158156 115 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm9613-201ENSMUST00000171662 196 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm26866-201ENSMUST00000180414 802 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm27538-201ENSMUST00000185065 294 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms