Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.31□□□□□ -1.56
Trim42Q9D2H5 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.31□□□□□ -1.56
Trim42Q9D2H5 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim42Q9D2H5 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim42Q9D2H5 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim42Q9D2H5 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.31□□□□□ -1.56
Trim42Q9D2H5 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Trim42Q9D2H5 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm14577-201ENSMUST00000121134 256 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm22718-201ENSMUST00000122701 315 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm23829-201ENSMUST00000157392 270 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm23354-201ENSMUST00000158426 104 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm10177-201ENSMUST00000160052 444 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm38044-201ENSMUST00000192964 487 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm42925-201ENSMUST00000197359 285 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm43105-201ENSMUST00000202987 459 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm8745-201ENSMUST00000207846 782 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Gm17999-201ENSMUST00000211568 542 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 AC145736.2-201ENSMUST00000216305 365 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 AC133598.3-201ENSMUST00000224322 568 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.3□□□□□ -1.56
Trim42Q9D2H5 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim42Q9D2H5 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm14622-201ENSMUST00000117117 468 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm14591-201ENSMUST00000120407 518 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm11384-201ENSMUST00000121376 303 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm13725-201ENSMUST00000122139 207 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm25290-201ENSMUST00000122796 144 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm24860-201ENSMUST00000158457 276 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm24175-201ENSMUST00000158931 129 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm24664-201ENSMUST00000158939 100 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm28527-201ENSMUST00000185210 297 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm45704-201ENSMUST00000212582 403 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 AL627387.1-201ENSMUST00000226063 250 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm26454-201ENSMUST00000082682 107 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm23460-201ENSMUST00000083258 109 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim42Q9D2H5 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm15844-201ENSMUST00000118016 576 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm15951-201ENSMUST00000118377 400 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm14570-201ENSMUST00000119444 391 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm13578-201ENSMUST00000120849 590 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm13007-201ENSMUST00000121866 365 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Trav20-201ENSMUST00000142754 347 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm25920-201ENSMUST00000158307 99 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm24676-201ENSMUST00000158758 75 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm3027-201ENSMUST00000167579 451 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms