Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm43487-201ENSMUST00000200331 1031 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm19096-201ENSMUST00000209705 766 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Gm8074-201ENSMUST00000095071 252 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ddx56Q9D0R4 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
Ddx56Q9D0R4 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm12640-201ENSMUST00000120097 310 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm13220-201ENSMUST00000121535 508 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm23887-201ENSMUST00000122683 172 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm24113-201ENSMUST00000157477 276 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm26171-201ENSMUST00000158422 131 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm20674-201ENSMUST00000177452 369 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm24315-201ENSMUST00000177835 127 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm17953-201ENSMUST00000192061 667 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm18956-201ENSMUST00000192857 480 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm44852-201ENSMUST00000207950 369 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 AC073947.3-201ENSMUST00000215576 766 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm5175-202ENSMUST00000219699 529 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.71□□□□□ -1.66
Ddx56Q9D0R4 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm23608-201ENSMUST00000104545 128 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm13386-201ENSMUST00000117677 124 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm11845-201ENSMUST00000117886 327 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm14362-201ENSMUST00000121679 273 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm15254-201ENSMUST00000149567 273 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm25447-201ENSMUST00000158997 128 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm27161-201ENSMUST00000183960 562 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm37692-201ENSMUST00000192633 232 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm43892-201ENSMUST00000204373 265 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm19032-201ENSMUST00000208584 592 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm17766-201ENSMUST00000209223 442 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm7984-201ENSMUST00000060640 538 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm22826-201ENSMUST00000083774 165 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ddx56Q9D0R4 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms