Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Gm12757-201ENSMUST00000119465 800 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Gm23824-201ENSMUST00000158741 276 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Gm15974-201ENSMUST00000159103 531 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Gm28871-201ENSMUST00000186191 687 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Gm9696-202ENSMUST00000191541 830 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 AC130536.1-201ENSMUST00000224425 271 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Gm8074-201ENSMUST00000095071 252 ntBASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col6a6Q8C6K9 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm26341-201ENSMUST00000104561 134 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm26622-201ENSMUST00000180520 298 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm27315-201ENSMUST00000183977 154 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm28146-201ENSMUST00000185517 701 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm28574-201ENSMUST00000185757 699 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm28057-201ENSMUST00000186603 615 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm28397-201ENSMUST00000187970 699 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm29366-201ENSMUST00000190481 699 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm44161-201ENSMUST00000203532 253 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm2676-201ENSMUST00000207279 606 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm14655-201ENSMUST00000120124 578 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm27399-201ENSMUST00000184250 78 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm19418-201ENSMUST00000197436 580 ntBASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col6a6Q8C6K9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Gm36985-201ENSMUST00000195595 379 ntBASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Gm43476-201ENSMUST00000197873 405 ntBASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Gm43512-201ENSMUST00000198495 176 ntBASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Gm45312-201ENSMUST00000210566 311 ntBASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 AC158641.1-201ENSMUST00000218933 229 ntBASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a6Q8C6K9 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Gm13406-201ENSMUST00000121991 256 ntBASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Gm24082-201ENSMUST00000175175 83 ntBASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Mir6406-201ENSMUST00000183592 120 ntBASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.02
Col6a6Q8C6K9 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Gm11866-201ENSMUST00000120209 335 ntBASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Gm24930-201ENSMUST00000158315 83 ntBASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Gm44308-201ENSMUST00000197080 99 ntBASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Gm18327-201ENSMUST00000202426 830 ntBASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Snord14e-201ENSMUST00000082857 90 ntBASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Gm22864-201ENSMUST00000083950 130 ntBASIC2.4□□□□□ -2.03
Col6a6Q8C6K9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 AC159476.1-201ENSMUST00000215914 1668 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm23472-201ENSMUST00000101806 191 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm13532-201ENSMUST00000120373 240 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm14848-201ENSMUST00000121850 467 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm25456-201ENSMUST00000157952 109 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm24497-201ENSMUST00000177868 191 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm25939-201ENSMUST00000179876 191 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm23444-201ENSMUST00000082922 191 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Mir7017-201ENSMUST00000184894 62 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm19086-201ENSMUST00000190772 665 ntBASIC2.39□□□□□ -2.03
Col6a6Q8C6K9 Gm37946-201ENSMUST00000192064 347 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms