Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm24784-201ENSMUST00000157640 62 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm24186-201ENSMUST00000157983 127 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm22891-201ENSMUST00000158641 164 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm17907-201ENSMUST00000173150 710 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm25361-201ENSMUST00000179358 76 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Mir6343-201ENSMUST00000183584 84 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm29350-201ENSMUST00000189141 541 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm42623-201ENSMUST00000197225 379 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Gm40692-201ENSMUST00000220411 491 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim47Q8C0E3 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm22273-201ENSMUST00000104040 132 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm26018-201ENSMUST00000104406 128 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm16032-201ENSMUST00000118534 168 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm15112-201ENSMUST00000120152 860 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm12110-201ENSMUST00000121601 579 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm10319-202ENSMUST00000159439 846 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm26622-201ENSMUST00000180520 298 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm27410-201ENSMUST00000183851 115 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm28399-201ENSMUST00000186221 318 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm28572-201ENSMUST00000187444 318 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm29365-201ENSMUST00000189461 699 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm37128-201ENSMUST00000192599 232 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm44463-201ENSMUST00000198895 137 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm2623-201ENSMUST00000199229 286 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm20368-201ENSMUST00000220716 301 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm23848-201ENSMUST00000083826 106 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim47Q8C0E3 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm24867-201ENSMUST00000104161 107 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm23593-201ENSMUST00000104309 120 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm14732-201ENSMUST00000121372 545 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm25321-201ENSMUST00000122558 102 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Mir5103-201ENSMUST00000175111 79 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm24713-201ENSMUST00000178850 107 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm25019-201ENSMUST00000179732 110 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm25448-201ENSMUST00000180065 107 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm45722-201ENSMUST00000213075 466 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm24706-201ENSMUST00000082806 137 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm22704-201ENSMUST00000083027 137 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm22293-201ENSMUST00000083314 109 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Trim47Q8C0E3 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.87□□□□□ -1.47
Trim47Q8C0E3 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Trim47Q8C0E3 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms