Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm7468-201ENSMUST00000203900 652 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm19252-201ENSMUST00000204705 305 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm25592-201ENSMUST00000082635 131 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm23851-201ENSMUST00000083831 103 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
Usp40Q8BWR4 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm23319-201ENSMUST00000104467 131 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm6923-201ENSMUST00000118343 406 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm11862-201ENSMUST00000119678 659 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm22951-201ENSMUST00000179471 107 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm28267-201ENSMUST00000191093 265 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm2979-201ENSMUST00000193442 463 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm3933-201ENSMUST00000195391 439 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm42579-201ENSMUST00000200512 734 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm44794-201ENSMUST00000206550 411 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm44543-201ENSMUST00000209136 396 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm6850-201ENSMUST00000210031 530 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.79□□□□□ -1.48
Usp40Q8BWR4 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Usp40Q8BWR4 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm14107-201ENSMUST00000117774 330 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm27342-201ENSMUST00000183530 109 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm8820-201ENSMUST00000204077 571 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm5322-201ENSMUST00000206142 699 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 AC115878.1-201ENSMUST00000227247 334 ntBASIC5.78□□□□□ -1.48
Usp40Q8BWR4 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Usp40Q8BWR4 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm25565-201ENSMUST00000104605 105 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm11625-201ENSMUST00000119535 296 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm14159-201ENSMUST00000119832 451 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm23162-201ENSMUST00000175081 121 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Mir1251-201ENSMUST00000175486 84 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm27190-201ENSMUST00000184890 542 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm36259-201ENSMUST00000197340 392 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Gm17887-201ENSMUST00000200194 547 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms