Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm20162-201ENSMUST00000193629 871 ntBASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Gm18016-201ENSMUST00000216119 801 ntBASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Gm18225-201ENSMUST00000216708 742 ntBASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Chmp2bQ8BJF9 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm12982-201ENSMUST00000117408 190 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm13640-201ENSMUST00000118445 264 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm26148-201ENSMUST00000157430 68 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm24059-201ENSMUST00000157493 312 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm24198-201ENSMUST00000157812 108 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm23032-201ENSMUST00000157995 107 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Mir1947-201ENSMUST00000158235 85 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm25369-201ENSMUST00000158848 132 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm3221-201ENSMUST00000164869 440 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm17030-201ENSMUST00000167016 393 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm20701-201ENSMUST00000176082 347 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm27580-201ENSMUST00000183666 149 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm28654-201ENSMUST00000189801 379 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm42850-201ENSMUST00000202094 201 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm45209-201ENSMUST00000207122 353 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm7786-201ENSMUST00000210494 436 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm18921-201ENSMUST00000221798 366 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Chmp2bQ8BJF9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm25765-201ENSMUST00000104100 132 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm11372-201ENSMUST00000117348 570 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm6664-201ENSMUST00000119138 468 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm14119-201ENSMUST00000119511 235 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm15452-201ENSMUST00000119877 240 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm11830-201ENSMUST00000120175 561 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm23111-201ENSMUST00000122652 105 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm22794-201ENSMUST00000157228 306 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Mir1251-201ENSMUST00000175486 84 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm27718-201ENSMUST00000183721 86 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm27861-201ENSMUST00000183920 214 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm30280-201ENSMUST00000192214 262 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm6240-201ENSMUST00000208014 473 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.77□□□□□ -1.81
Chmp2bQ8BJF9 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms