Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm22917-201ENSMUST00000180116 110 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Mir7022-201ENSMUST00000183749 61 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm29229-201ENSMUST00000188874 323 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm8069-201ENSMUST00000197887 154 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm24764-201ENSMUST00000083686 199 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Olfr575-201ENSMUST00000084812 957 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.55□□□□□ -1.52
Trim56Q80VI1 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.55□□□□□ -1.52
Trim56Q80VI1 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm23608-201ENSMUST00000104545 128 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm12765-201ENSMUST00000117273 615 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm7363-201ENSMUST00000119883 399 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm24113-201ENSMUST00000157477 276 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm24689-201ENSMUST00000157760 104 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm26312-201ENSMUST00000157769 165 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm25671-201ENSMUST00000178612 105 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm23307-201ENSMUST00000179167 105 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm25286-201ENSMUST00000179790 105 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm29231-201ENSMUST00000179850 319 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm37636-201ENSMUST00000193583 359 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm5552-201ENSMUST00000197149 515 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm45814-201ENSMUST00000212646 775 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm9068-201ENSMUST00000217393 455 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm25410-201ENSMUST00000083758 137 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 AC160115.1-201ENSMUST00000224678 1574 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.54□□□□□ -1.52
Trim56Q80VI1 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim56Q80VI1 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm14142-201ENSMUST00000117833 296 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm13932-201ENSMUST00000120873 610 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm14980-201ENSMUST00000121247 736 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm14972-201ENSMUST00000121780 364 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm14804-201ENSMUST00000122322 508 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm22345-201ENSMUST00000122644 107 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm24774-201ENSMUST00000157384 134 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Zakit-201ENSMUST00000157677 308 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm22085-201ENSMUST00000158344 110 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm23760-201ENSMUST00000158350 116 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm23579-201ENSMUST00000158528 103 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm28385-201ENSMUST00000185671 292 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm28781-201ENSMUST00000185760 696 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm4854-201ENSMUST00000185902 574 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm6075-201ENSMUST00000186816 486 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm29307-201ENSMUST00000187367 696 ntBASIC5.53□□□□□ -1.52
Trim56Q80VI1 Gm29339-201ENSMUST00000189613 696 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms