Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cpsf6Q6NVF9 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm24230-201ENSMUST00000104313 129 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm15073-201ENSMUST00000117432 634 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm4853-201ENSMUST00000119359 394 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm14521-201ENSMUST00000119545 350 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm24577-201ENSMUST00000158580 63 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm25361-201ENSMUST00000179358 76 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Mir6400-201ENSMUST00000184870 92 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm28468-201ENSMUST00000188536 615 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18964-201ENSMUST00000193013 563 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm37030-201ENSMUST00000194254 295 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18036-201ENSMUST00000195256 272 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm44348-201ENSMUST00000200165 122 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm44609-201ENSMUST00000207157 460 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18468-201ENSMUST00000207321 369 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18470-201ENSMUST00000207467 420 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18465-201ENSMUST00000207468 369 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18464-201ENSMUST00000207803 420 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18458-201ENSMUST00000207908 369 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm18461-201ENSMUST00000208421 420 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm44543-201ENSMUST00000209136 396 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm46327-201ENSMUST00000218240 365 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm23330-201ENSMUST00000082660 164 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Snord47-201ENSMUST00000083034 77 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Cpsf6Q6NVF9 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm12039-201ENSMUST00000118219 180 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm8217-201ENSMUST00000119136 465 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm6884-201ENSMUST00000119318 615 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm14601-201ENSMUST00000120892 236 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm23901-201ENSMUST00000157570 107 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm23965-201ENSMUST00000157969 142 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm28263-201ENSMUST00000185884 400 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm29350-201ENSMUST00000189141 541 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm4322-201ENSMUST00000191094 336 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm38044-201ENSMUST00000192964 487 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm2623-201ENSMUST00000199229 286 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm21937-201ENSMUST00000222825 218 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm7768-201ENSMUST00000222988 597 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm9386-201ENSMUST00000095195 381 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cpsf6Q6NVF9 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cpsf6Q6NVF9 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 123.8 ms